GenomeNet

Database: UniProt
Entry: A0A0R0CGJ1_9GAMM
LinkDB: A0A0R0CGJ1_9GAMM
Original site: A0A0R0CGJ1_9GAMM 
ID   A0A0R0CGJ1_9GAMM        Unreviewed;       211 AA.
AC   A0A0R0CGJ1;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   24-JAN-2024, entry version 25.
DE   RecName: Full=Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077};
GN   Name=rimP {ECO:0000256|HAMAP-Rule:MF_01077};
GN   ORFNames=ABB29_10410 {ECO:0000313|EMBL:KRG68879.1};
OS   Pseudoxanthomonas dokdonensis.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Pseudoxanthomonas.
OX   NCBI_TaxID=344882 {ECO:0000313|EMBL:KRG68879.1, ECO:0000313|Proteomes:UP000052052};
RN   [1] {ECO:0000313|EMBL:KRG68879.1, ECO:0000313|Proteomes:UP000052052}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 21858 {ECO:0000313|EMBL:KRG68879.1,
RC   ECO:0000313|Proteomes:UP000052052};
RA   Patil P.P., Midha S., Patil P.B.;
RT   "Genome sequencing and analysis of members of genus Stenotrophomonas.";
RL   Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Required for maturation of 30S ribosomal subunits.
CC       {ECO:0000256|HAMAP-Rule:MF_01077}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01077}.
CC   -!- SIMILARITY: Belongs to the RimP family. {ECO:0000256|HAMAP-
CC       Rule:MF_01077}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRG68879.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; LDJL01000011; KRG68879.1; -; Genomic_DNA.
DR   RefSeq; WP_057658768.1; NZ_LDJL01000011.1.
DR   AlphaFoldDB; A0A0R0CGJ1; -.
DR   STRING; 344882.ABB29_10410; -.
DR   PATRIC; fig|344882.3.peg.454; -.
DR   OrthoDB; 9805006at2; -.
DR   Proteomes; UP000052052; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR   CDD; cd01734; YlxS_C; 1.
DR   Gene3D; 2.30.30.180; Ribosome maturation factor RimP, C-terminal domain; 1.
DR   Gene3D; 3.30.300.70; RimP-like superfamily, N-terminal; 1.
DR   HAMAP; MF_01077; RimP; 1.
DR   InterPro; IPR003728; Ribosome_maturation_RimP.
DR   InterPro; IPR028998; RimP_C.
DR   InterPro; IPR036847; RimP_C_sf.
DR   InterPro; IPR028989; RimP_N.
DR   InterPro; IPR035956; RimP_N_sf.
DR   PANTHER; PTHR33867; RIBOSOME MATURATION FACTOR RIMP; 1.
DR   PANTHER; PTHR33867:SF1; RIBOSOME MATURATION FACTOR RIMP; 1.
DR   Pfam; PF17384; DUF150_C; 1.
DR   Pfam; PF02576; RimP_N; 1.
DR   SUPFAM; SSF74942; YhbC-like, C-terminal domain; 1.
DR   SUPFAM; SSF75420; YhbC-like, N-terminal domain; 1.
PE   3: Inferred from homology;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_01077};
KW   Reference proteome {ECO:0000313|Proteomes:UP000052052};
KW   Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517, ECO:0000256|HAMAP-
KW   Rule:MF_01077}.
FT   DOMAIN          11..89
FT                   /note="Ribosome maturation factor RimP N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02576"
FT   DOMAIN          92..157
FT                   /note="Ribosome maturation factor RimP C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF17384"
FT   REGION          161..211
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   211 AA;  22558 MW;  6E5188F5751E48FA CRC64;
     MSEKANQIAS LLAPTVQALG LELLGAEYLP APGSATLRLY IDVPAAEQDS RIVNIDDCET
     VSREVSAQLD VEDPITGNYT LEVSSPGIDR PLFTLQQFAR HQGESAKVNL KLPQLGRRRL
     QGMIVRIEDE QVVFAVDGNE VPVAFDNIDK ARLVPDWAAL GFAPEKPGRK PKSGTGPSGA
     GAKKTGAQKP APKKTGKQPS NKPAATKPRA E
//
DBGET integrated database retrieval system