ID A0A0R1Y6H3_9LACO Unreviewed; 326 AA.
AC A0A0R1Y6H3;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=Transposase {ECO:0000313|EMBL:KRM37661.1};
GN ORFNames=FC39_GL000086 {ECO:0000313|EMBL:KRM37661.1};
OS Lactobacillus hamsteri DSM 5661 = JCM 6256.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lactobacillus.
OX NCBI_TaxID=1423754 {ECO:0000313|EMBL:KRM37661.1, ECO:0000313|Proteomes:UP000051223};
RN [1] {ECO:0000313|EMBL:KRM37661.1, ECO:0000313|Proteomes:UP000051223}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 5661 {ECO:0000313|EMBL:KRM37661.1,
RC ECO:0000313|Proteomes:UP000051223};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRM37661.1}.
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DR EMBL; AZGI01000073; KRM37661.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R1Y6H3; -.
DR STRING; 1423754.FC39_GL000086; -.
DR PATRIC; fig|1423754.3.peg.90; -.
DR eggNOG; COG0675; Bacteria.
DR Proteomes; UP000051223; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000051223};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 98..230
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 244..313
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 326 AA; 37774 MW; F14A7CACDC5C8CB3 CRC64;
MKNSDSSSLQ LVNEFLTQSW KNFFQDKTGK IGKPRFHSRK YLKKSYTGKS IIKIVGRRYL
KIPKLGYIKT SKTGALRNIK IKRYTVMLEP TGKYYLSLQA EVPEPQKHRL TGKAIGIDVG
VADLAILSNG LKYSSFDGSY FEKKAKAWQR KYSRRRHWAK LLALQDKNRK VLCPRSLESF
ANWQKAQKLK ARYQAKAANQ RKDYLHKLTT HLVKQYDVIV IEDLKTKNLQ HNHCLAKSIA
NASWRMFRQM LEYKCKWYGK KLIAVDPKNT SRICSECSYN SGAKPLEIRE WTCPKCQTRH
DRDINAAINI LHKARPTGQG LAMVKS
//
