GenomeNet

Database: UniProt
Entry: A0A0R4IAV1_DANRE
LinkDB: A0A0R4IAV1_DANRE
Original site: A0A0R4IAV1_DANRE 
ID   A0A0R4IAV1_DANRE        Unreviewed;       418 AA.
AC   A0A0R4IAV1;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   27-SEP-2017, entry version 10.
DE   SubName: Full=Stromal antigen 3 {ECO:0000313|Ensembl:ENSDARP00000131710};
DE   Flags: Fragment;
GN   Name=stag3 {ECO:0000313|Ensembl:ENSDARP00000131710,
GN   ECO:0000313|ZFIN:ZDB-GENE-140106-130};
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000131710, ECO:0000313|Proteomes:UP000000437};
RN   [1] {ECO:0000313|Ensembl:ENSDARP00000131710, ECO:0000313|Proteomes:UP000000437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000131710,
RC   ECO:0000313|Proteomes:UP000000437};
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA   Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA   McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA   Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA   Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA   Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA   Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA   Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA   Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA   Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA   Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA   Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA   Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA   Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA   Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA   Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA   Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA   Saunders D., Wallis J., Babbage A., Hammond S.,
RA   Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA   Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA   Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA   Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA   Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA   Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA   Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA   Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA   Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA   Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA   Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA   Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA   Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the
RT   human genome.";
RL   Nature 496:498-503(2013).
RN   [2] {ECO:0000313|Ensembl:ENSDARP00000131710}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000131710};
RG   Ensembl;
RL   Submitted (NOV-2015) to UniProtKB.
CC   -!- CAUTION: The sequence shown here is derived from an Ensembl
CC       automatic analysis pipeline and should be considered as
CC       preliminary data. {ECO:0000313|Ensembl:ENSDARP00000131710}.
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DR   EMBL; CABZ01072631; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   STRING; 7955.ENSDARP00000101414; -.
DR   Ensembl; ENSDART00000171444; ENSDARP00000131710; ENSDARG00000104388.
DR   ZFIN; ZDB-GENE-140106-130; stag3.
DR   GeneTree; ENSGT00390000014094; -.
DR   OMA; ELATEWI; -.
DR   Proteomes; UP000000437; Chromosome 14.
DR   Gene3D; 1.25.10.10; -; 1.
DR   InterPro; IPR011989; ARM-like.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR020839; SCD.
DR   InterPro; IPR013721; STAG.
DR   Pfam; PF08514; STAG; 1.
DR   SUPFAM; SSF48371; SSF48371; 1.
DR   PROSITE; PS51425; SCD; 1.
PE   1: Evidence at protein level;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW   Proteomics identification {ECO:0000213|PeptideAtlas:A0A0R4IAV1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT   DOMAIN      279    364       SCD. {ECO:0000259|PROSITE:PS51425}.
FT   COILED      233    270       {ECO:0000256|SAM:Coils}.
FT   NON_TER     418    418       {ECO:0000313|Ensembl:ENSDARP00000131710}.
SQ   SEQUENCE   418 AA;  47335 MW;  E7B85B5B85AF1CF0 CRC64;
     MTEPYSSEDD SISLTGSDFE FQLKTSKRKV NSTQGVASPN RVHRRPASAL SSSQSQAPTD
     SEGGVSTAYL YEAVRSGRSA LTTVIDDWLE EYQRDKEAGL LELINFVVQC SGCKGVVSRE
     MLSSLQNADI ISHLTKEFNE DSVSYPLVSS GPQWRRFSEG VCEFVCVLVR GCRNTLLYDD
     FLFSSFIALL TGLADSQVRA FRHTSSFIAM RLMSSIVSVA ADVNIQAQMI QRRSDLEKSK
     PAEERAIDRL EELEHSYREL MEQQEDLRSL MNGIFKGVFV HRYRDVIPEI RAVCMEEMGV
     WLRENPAHFL NDEHLKYVGW MLHDKQAAVR LQCVLTLQKL FEEKDFLSRL EFFTSRFKER
     ILCMILDKDS DVAVETVKLL LLIQTQTDDG LSASERAAVY PLVFATHRGL ACAAGRFL
//
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