ID A0A0S1S2B2_9FLAO Unreviewed; 286 AA.
AC A0A0S1S2B2;
DT 17-FEB-2016, integrated into UniProtKB/TrEMBL.
DT 17-FEB-2016, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE SubName: Full=Cupin {ECO:0000313|EMBL:ALM06866.1};
GN ORFNames=SB49_02895 {ECO:0000313|EMBL:ALM06866.1};
OS Sediminicola sp. YIK13.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Sediminicola.
OX NCBI_TaxID=1453352 {ECO:0000313|EMBL:ALM06866.1, ECO:0000313|Proteomes:UP000063759};
RN [1] {ECO:0000313|Proteomes:UP000063759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YIK13 {ECO:0000313|Proteomes:UP000063759};
RA Kwon Y.M., Kim S.-J.;
RT "Genome sequence of Sediminicola sp. YIK13.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ALM06866.1, ECO:0000313|Proteomes:UP000063759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YIK13 {ECO:0000313|EMBL:ALM06866.1,
RC ECO:0000313|Proteomes:UP000063759};
RX PubMed=26823585;
RA Kwon Y.M., Kim S.J.;
RT "Complete Genome Sequence of the Proteorhodopsin-Containing Marine
RT Bacterium Sediminicola sp. YIK13.";
RL Genome Announc. 4:e01635-15(2016).
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DR EMBL; CP010535; ALM06866.1; -; Genomic_DNA.
DR RefSeq; WP_062053675.1; NZ_CP010535.1.
DR AlphaFoldDB; A0A0S1S2B2; -.
DR STRING; 1453352.SB49_02895; -.
DR KEGG; syi:SB49_02895; -.
DR PATRIC; fig|1453352.4.peg.602; -.
DR OrthoDB; 1410704at2; -.
DR Proteomes; UP000063759; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR InterPro; IPR013096; Cupin_2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR PANTHER; PTHR43280; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43280:SF2; BIFUNCTIONAL TRANSCRIPTIONAL ACTIVATOR/DNA REPAIR ENZYME ADAA; 1.
DR Pfam; PF07883; Cupin_2; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF51182; RmlC-like cupins; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000063759};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 180..279
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 286 AA; 33431 MW; 8BF20614097CE6CA CRC64;
MKVYPFKIPK PIHENLVLQI DEGPHFYDKL HQHEEIQLSL IVRGQGKLIV ADSIHQFKEG
DIFVIGRNCP HLFQNNGLAK DSCKMISLFF TRQTFGEAFF NNPELEEIIH FFPNAESGFQ
LLNKKTKVSQ IIYKISETDK FNRFLLFLKL LKKICQAKTK VLTKFVYPKT ISFNEGQRMR
TIFDYVIHNF QSEITLDTIS SIAHLTPNAF CRFFKQRTNK TFFQFLIELR IEHACQLLLN
ERDLSIIEIS DASGFNSISN FNRKFKALKG NTPSEYQQLK KSNIYS
//