ID A0A0S4JM77_BODSA Unreviewed; 446 AA.
AC A0A0S4JM77;
DT 17-FEB-2016, integrated into UniProtKB/TrEMBL.
DT 17-FEB-2016, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Transcription elongation factor s-II, putative {ECO:0000313|EMBL:CUG92609.1};
GN ORFNames=BSAL_38470 {ECO:0000313|EMBL:CUG92609.1};
OS Bodo saltans (Flagellated protozoan).
OC Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina;
OC Eubodonida; Bodonidae; Bodo.
OX NCBI_TaxID=75058 {ECO:0000313|EMBL:CUG92609.1, ECO:0000313|Proteomes:UP000051952};
RN [1] {ECO:0000313|Proteomes:UP000051952}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Lake Konstanz {ECO:0000313|Proteomes:UP000051952};
RG Pathogen Informatics;
RL Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CYKH01002065; CUG92609.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0S4JM77; -.
DR VEuPathDB; TriTrypDB:BSAL_38470; -.
DR OMA; ICFFETS; -.
DR OrthoDB; 166913at2759; -.
DR Proteomes; UP000051952; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd05162; PWWP; 1.
DR CDD; cd13749; Zn-ribbon_TFIIS; 1.
DR Gene3D; 2.20.25.10; -; 1.
DR Gene3D; 2.30.30.140; -; 1.
DR InterPro; IPR000313; PWWP_dom.
DR InterPro; IPR012164; Rpa12/Rpb9/Rpc10/TFS.
DR InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR InterPro; IPR001222; Znf_TFIIS.
DR PANTHER; PTHR11239; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR11239:SF25; TRANSCRIPTION ELONGATION FACTOR-LIKE PROTEIN; 1.
DR Pfam; PF00855; PWWP; 1.
DR Pfam; PF01096; TFIIS_C; 1.
DR SMART; SM00440; ZnF_C2C2; 1.
DR SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR SUPFAM; SSF63748; Tudor/PWWP/MBT; 1.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS51133; ZF_TFIIS_2; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Elongation factor {ECO:0000313|EMBL:CUG92609.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Protein biosynthesis {ECO:0000313|EMBL:CUG92609.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000051952};
KW Transcription {ECO:0000256|ARBA:ARBA00022478};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00472}.
FT DOMAIN 404..444
FT /note="TFIIS-type"
FT /evidence="ECO:0000259|PROSITE:PS51133"
FT REGION 99..128
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 446 AA; 48394 MW; 0F8B883A0493107F CRC64;
MSLDLVFQPG DRVWVFTADE WWPAKVIDPE QATMMSGSAI PPGIDYVVLY YGDESSLGFV
SAAELEAFED SSGKAVTTDP AMKKAIKLAA EDATANPLRV VAQSSTKRPA DRAAERGGAS
TGAGAGAAVA KKARKETIGT NGSSFSKGGD DGDDGDCYPR GAQGYRYESV QFLMDIEKRL
RAAVETNDIN SARKQLLKLD HVKITRDQLA ATKIGVAIGD VLGNVGLAKL WPLAQALVNW
FILALPRQTI QAIQHFHEVH SASEAELSAA KEVVAAATAG SSFLSRSSTS LRTLDKVIAV
FRADQEASGV TMPANFNLNS FIEAFFADIR DADHKRIFLS FLTKPGLSKL RRQILDGTLT
GEAFSRLSSN DFVTDDEKNA EEAKIRAIIA AQEEEDKINS VGTTMFECPN CKKKNATYHE
QQTRGADEPT TKFVKCIECK HNWTTE
//
