ID A0A0S8DYV8_9GAMM Unreviewed; 253 AA.
AC A0A0S8DYV8;
DT 17-FEB-2016, integrated into UniProtKB/TrEMBL.
DT 17-FEB-2016, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE RecName: Full=HTH-type transcriptional repressor AllR {ECO:0000256|ARBA:ARBA00040379};
DE AltName: Full=Negative regulator of allantoin and glyoxylate utilization operons {ECO:0000256|ARBA:ARBA00042627};
GN ORFNames=AMJ69_00610 {ECO:0000313|EMBL:KPK40902.1};
OS Gammaproteobacteria bacterium SG8_47.
OC Bacteria; Pseudomonadota; Gammaproteobacteria.
OX NCBI_TaxID=1703406 {ECO:0000313|EMBL:KPK40902.1, ECO:0000313|Proteomes:UP000054199};
RN [1] {ECO:0000313|EMBL:KPK40902.1, ECO:0000313|Proteomes:UP000054199}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SG8_47 {ECO:0000313|EMBL:KPK40902.1};
RX PubMed=25922666; DOI=10.1186/s40168-015-0077-6;
RA Baker B.J., Lazar C.S., Teske A.P., Dick G.J.;
RT "Genomic resolution of linkages in carbon, nitrogen, and sulfur cycling
RT among widespread estuary sediment bacteria.";
RL Microbiome 3:14-14(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPK40902.1}.
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DR EMBL; LJTV01000004; KPK40902.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0S8DYV8; -.
DR STRING; 1703406.AMJ69_00610; -.
DR PATRIC; fig|1703406.3.peg.2400; -.
DR Proteomes; UP000054199; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF24; HTH-TYPE TRANSCRIPTIONAL REPRESSOR ALLR; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 7..68
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 69..248
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 253 AA; 27323 MW; 5F8CCAD17E4F4124 CRC64;
MDRPSGIQVI DRMAQLLDAL ARNDGEASLK ILSAETGLHP STAFRILGSL VQVEFVERTP
GGSYRLGAKL RQLVGRIPMA RDLRAEALPV MERLRDELGE TVNLTVREAD DVVYIERVAP
RRMMRVEQVI GSRAPLHVTA VGKLMLGEEG QAGCRAYARR TGLPAFTTNT ITGSEELSGA
CAAAHQAGYA LDNEEAELGV GCIGVLVRDA SGRAVAGLSV SAPIERRRDE WITLVRQAGE
RLSSRLGLLN VRG
//
