ID A0A0S9NEF8_9BURK Unreviewed; 619 AA.
AC A0A0S9NEF8;
DT 17-FEB-2016, integrated into UniProtKB/TrEMBL.
DT 17-FEB-2016, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE RecName: Full=Diguanylate cyclase {ECO:0008006|Google:ProtNLM};
GN ORFNames=ASF44_29425 {ECO:0000313|EMBL:KQP43689.1};
OS Pseudorhodoferax sp. Leaf274.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae.
OX NCBI_TaxID=1736318 {ECO:0000313|EMBL:KQP43689.1, ECO:0000313|Proteomes:UP000051759};
RN [1] {ECO:0000313|EMBL:KQP43689.1, ECO:0000313|Proteomes:UP000051759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf274 {ECO:0000313|EMBL:KQP43689.1,
RC ECO:0000313|Proteomes:UP000051759};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQP43689.1, ECO:0000313|Proteomes:UP000051759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf274 {ECO:0000313|EMBL:KQP43689.1,
RC ECO:0000313|Proteomes:UP000051759};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQP43689.1}.
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DR EMBL; LMNA01000010; KQP43689.1; -; Genomic_DNA.
DR RefSeq; WP_056899754.1; NZ_LMNA01000010.1.
DR AlphaFoldDB; A0A0S9NEF8; -.
DR STRING; 1736318.ASF44_29425; -.
DR OrthoDB; 3687827at2; -.
DR Proteomes; UP000051759; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR CDD; cd12915; PDC2_DGC_like; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 3.
DR InterPro; IPR033479; dCache_1.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF9; ANTI-FLHC(2)FLHD(4) FACTOR YDIV; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF02743; dCache_1; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00989; PAS; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000051759};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 17..40
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 294..312
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 324..393
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 397..449
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 481..619
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 619 AA; 67637 MW; 64E89B22AE1573F9 CRC64;
MNVDEGARAR LPTLPPWLVS AVGPLLIIVL VLALAALAVA TDRARSRERA LVGTQNLARL
IEAQLSDNFD KIDVYLQLTA LRHGALLQGG AGGTAAPLPA EQPQLARIAL DSVAIADAGG
TVRLRSASAP GPAEHVGGQE FFRRAVAAPR AALVVVGPVR NAPDSAPRMV FARAVRDPQG
SLQGVVFADM SGAQFDQLFE GVDLGRHGAA ALLTEDLRAV HYHPSATGLP ASVSVQLREA
VRRAPMEGAY DAAGTMDGHQ RINAYRRLRD HPFYVIVGRS TLDAMAGWRA NTRMVAALAG
LTIVLTLWAW LMQVRWSRRQ LRALHNRFEA IVQTSSDSIV SKTLQGRITT WNRGAQQMFG
YTEAEMLGQS AVRLAPPDRR AEDAVLTARV QRGESLQAYE TQRLRKDGTV IDVSMAVSPV
LDARGRIAGI SVIARDISQH KAMEAEIRAM AFNDPLTRLP NRRLLMDRLR QAQLSSSRQR
SYFGVLFIDL DGFKRVNDGF GHEVGDQLLI EIGRRLQAAV RQHDTVSRLG GDEFVVLLEE
LGVDEKTAAD HVNTVADKIL DAIERDYHLR GDTHRCSASI GIRLLVGSQE SPEQVLMDAD
AAMYSVKRQR RALKTFAFE
//