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Database: UniProt
Entry: A0A0S9NEF8_9BURK
LinkDB: A0A0S9NEF8_9BURK
Original site: A0A0S9NEF8_9BURK 
ID   A0A0S9NEF8_9BURK        Unreviewed;       619 AA.
AC   A0A0S9NEF8;
DT   17-FEB-2016, integrated into UniProtKB/TrEMBL.
DT   17-FEB-2016, sequence version 1.
DT   24-JAN-2024, entry version 26.
DE   RecName: Full=Diguanylate cyclase {ECO:0008006|Google:ProtNLM};
GN   ORFNames=ASF44_29425 {ECO:0000313|EMBL:KQP43689.1};
OS   Pseudorhodoferax sp. Leaf274.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae.
OX   NCBI_TaxID=1736318 {ECO:0000313|EMBL:KQP43689.1, ECO:0000313|Proteomes:UP000051759};
RN   [1] {ECO:0000313|EMBL:KQP43689.1, ECO:0000313|Proteomes:UP000051759}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Leaf274 {ECO:0000313|EMBL:KQP43689.1,
RC   ECO:0000313|Proteomes:UP000051759};
RA   Gilbert D.G.;
RL   Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:KQP43689.1, ECO:0000313|Proteomes:UP000051759}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Leaf274 {ECO:0000313|EMBL:KQP43689.1,
RC   ECO:0000313|Proteomes:UP000051759};
RA   Schulze-Lefert P.;
RT   "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL   Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KQP43689.1}.
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DR   EMBL; LMNA01000010; KQP43689.1; -; Genomic_DNA.
DR   RefSeq; WP_056899754.1; NZ_LMNA01000010.1.
DR   AlphaFoldDB; A0A0S9NEF8; -.
DR   STRING; 1736318.ASF44_29425; -.
DR   OrthoDB; 3687827at2; -.
DR   Proteomes; UP000051759; Unassembled WGS sequence.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd01949; GGDEF; 1.
DR   CDD; cd00130; PAS; 1.
DR   CDD; cd12915; PDC2_DGC_like; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 3.
DR   InterPro; IPR033479; dCache_1.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   InterPro; IPR001610; PAC.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR000700; PAS-assoc_C.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013767; PAS_fold.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   NCBIfam; TIGR00254; GGDEF; 1.
DR   NCBIfam; TIGR00229; sensory_box; 1.
DR   PANTHER; PTHR44757:SF9; ANTI-FLHC(2)FLHD(4) FACTOR YDIV; 1.
DR   PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR   Pfam; PF02743; dCache_1; 1.
DR   Pfam; PF00990; GGDEF; 1.
DR   Pfam; PF00989; PAS; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SMART; SM00086; PAC; 1.
DR   SMART; SM00091; PAS; 1.
DR   SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR   SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR   PROSITE; PS50887; GGDEF; 1.
DR   PROSITE; PS50113; PAC; 1.
DR   PROSITE; PS50112; PAS; 1.
PE   4: Predicted;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000051759};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        17..40
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        294..312
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          324..393
FT                   /note="PAS"
FT                   /evidence="ECO:0000259|PROSITE:PS50112"
FT   DOMAIN          397..449
FT                   /note="PAC"
FT                   /evidence="ECO:0000259|PROSITE:PS50113"
FT   DOMAIN          481..619
FT                   /note="GGDEF"
FT                   /evidence="ECO:0000259|PROSITE:PS50887"
SQ   SEQUENCE   619 AA;  67637 MW;  64E89B22AE1573F9 CRC64;
     MNVDEGARAR LPTLPPWLVS AVGPLLIIVL VLALAALAVA TDRARSRERA LVGTQNLARL
     IEAQLSDNFD KIDVYLQLTA LRHGALLQGG AGGTAAPLPA EQPQLARIAL DSVAIADAGG
     TVRLRSASAP GPAEHVGGQE FFRRAVAAPR AALVVVGPVR NAPDSAPRMV FARAVRDPQG
     SLQGVVFADM SGAQFDQLFE GVDLGRHGAA ALLTEDLRAV HYHPSATGLP ASVSVQLREA
     VRRAPMEGAY DAAGTMDGHQ RINAYRRLRD HPFYVIVGRS TLDAMAGWRA NTRMVAALAG
     LTIVLTLWAW LMQVRWSRRQ LRALHNRFEA IVQTSSDSIV SKTLQGRITT WNRGAQQMFG
     YTEAEMLGQS AVRLAPPDRR AEDAVLTARV QRGESLQAYE TQRLRKDGTV IDVSMAVSPV
     LDARGRIAGI SVIARDISQH KAMEAEIRAM AFNDPLTRLP NRRLLMDRLR QAQLSSSRQR
     SYFGVLFIDL DGFKRVNDGF GHEVGDQLLI EIGRRLQAAV RQHDTVSRLG GDEFVVLLEE
     LGVDEKTAAD HVNTVADKIL DAIERDYHLR GDTHRCSASI GIRLLVGSQE SPEQVLMDAD
     AAMYSVKRQR RALKTFAFE
//
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