ID A0A0U2VW02_9BACL Unreviewed; 281 AA.
AC A0A0U2VW02;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains {ECO:0000313|EMBL:SDI70348.1};
DE SubName: Full=RpiR family transcriptional regulator {ECO:0000313|EMBL:ALS20436.1};
GN ORFNames=IJ22_00440 {ECO:0000313|EMBL:ALS20436.1}, SAMN05421868_109136
GN {ECO:0000313|EMBL:SDI70348.1};
OS Paenibacillus naphthalenovorans.
OC Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
OX NCBI_TaxID=162209 {ECO:0000313|EMBL:ALS20436.1, ECO:0000313|Proteomes:UP000061660};
RN [1] {ECO:0000313|Proteomes:UP000061660}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=32O-Y {ECO:0000313|Proteomes:UP000061660};
RA Butler R.III., Wang J., Stark B.C., Pombert J.-F.;
RT "Complete genome sequences of two moderately thermophilic Paenibacillus
RT species.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ALS20436.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=32O-Y {ECO:0000313|EMBL:ALS20436.1};
RA Shamseldin A., Moawad H., Abd El-Rahim W.M., Sadowsky M.J.;
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:ALS20436.1, ECO:0000313|Proteomes:UP000061660}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=32O-Y {ECO:0000313|EMBL:ALS20436.1,
RC ECO:0000313|Proteomes:UP000061660};
RX PubMed=26868401;
RA Butler R.R.III., Wang J., Stark B.C., Pombert J.F.;
RT "Complete Genome Sequences of Two Interactive Moderate Thermophiles,
RT Paenibacillus napthalenovorans 32O-Y and Paenibacillus sp. 32O-W.";
RL Genome Announc. 4:e01717-15(2016).
RN [4] {ECO:0000313|EMBL:SDI70348.1, ECO:0000313|Proteomes:UP000182184}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PR-N1 {ECO:0000313|EMBL:SDI70348.1,
RC ECO:0000313|Proteomes:UP000182184};
RA Varghese N., Submissions S.;
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP013652; ALS20436.1; -; Genomic_DNA.
DR EMBL; FNDY01000009; SDI70348.1; -; Genomic_DNA.
DR RefSeq; WP_062406321.1; NZ_FNDY01000009.1.
DR AlphaFoldDB; A0A0U2VW02; -.
DR STRING; 162209.IJ22_00440; -.
DR KEGG; pnp:IJ22_00440; -.
DR PATRIC; fig|162209.4.peg.37; -.
DR OrthoDB; 3684496at2; -.
DR Proteomes; UP000061660; Chromosome.
DR Proteomes; UP000182184; Unassembled WGS sequence.
DR GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR CDD; cd05013; SIS_RpiR; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR000281; HTH_RpiR.
DR InterPro; IPR047640; RpiR-like.
DR InterPro; IPR035472; RpiR-like_SIS.
DR InterPro; IPR001347; SIS_dom.
DR InterPro; IPR046348; SIS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR30514; GLUCOKINASE; 1.
DR PANTHER; PTHR30514:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATOR HEXR-RELATED; 1.
DR Pfam; PF01418; HTH_6; 1.
DR Pfam; PF01380; SIS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53697; SIS domain; 1.
DR PROSITE; PS51071; HTH_RPIR; 1.
DR PROSITE; PS51464; SIS; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:SDI70348.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000061660}.
FT DOMAIN 2..77
FT /note="HTH rpiR-type"
FT /evidence="ECO:0000259|PROSITE:PS51071"
FT DOMAIN 123..263
FT /note="SIS"
FT /evidence="ECO:0000259|PROSITE:PS51464"
SQ SEQUENCE 281 AA; 31090 MW; A9C68F44355F1051 CRC64;
MATFQHRVKA IEKEMTNSEK KIYSILSQTE KPFLLSMNEL SKLSEVSEPS VVRFYRRLGY
ASYQELKVAL VQENANDNAA GSIYEEIDLS DSADQIFHKI IDQTMVALHT TKELINYEAV
ERAGAMMAAA KRLFFFGQGV SGIMASDAAH KFLRLGETVM PIIDLHMEAI AASHMNEGDV
IVAISHSGES EGLLKVLQLA KEKQARIIVI TGFSKSSIAQ IADELLVTSA NETNYRPDAM
VSRIVQMTII DCLYVITVLH KGNHAIEAVN LSRLAVAKLK T
//
