ID A0A0V0RGU0_9BILA Unreviewed; 1010 AA.
AC A0A0V0RGU0;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Polyubiquitin-B {ECO:0000313|EMBL:KRX13715.1};
GN Name=UBB {ECO:0000313|EMBL:KRX13715.1};
GN ORFNames=T07_683 {ECO:0000313|EMBL:KRX13715.1};
OS Trichinella nelsoni.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6336 {ECO:0000313|EMBL:KRX13715.1, ECO:0000313|Proteomes:UP000054630};
RN [1] {ECO:0000313|EMBL:KRX13715.1, ECO:0000313|Proteomes:UP000054630}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS37 {ECO:0000313|EMBL:KRX13715.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the DNase II family.
CC {ECO:0000256|ARBA:ARBA00007527}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX13715.1}.
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DR EMBL; JYDL01000186; KRX13715.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0RGU0; -.
DR Proteomes; UP000054630; Unassembled WGS sequence.
DR GO; GO:0004531; F:deoxyribonuclease II activity; IEA:InterPro.
DR CDD; cd01803; Ubl_ubiquitin; 4.
DR InterPro; IPR004947; DNase_II.
DR InterPro; IPR022617; Rad60/SUMO-like_dom.
DR InterPro; IPR000626; Ubiquitin-like_dom.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR InterPro; IPR019954; Ubiquitin_CS.
DR InterPro; IPR019956; Ubiquitin_dom.
DR PANTHER; PTHR10666:SF491; POLYUBIQUITIN; 1.
DR PANTHER; PTHR10666; UBIQUITIN; 1.
DR Pfam; PF03265; DNase_II; 2.
DR Pfam; PF11976; Rad60-SLD; 1.
DR Pfam; PF00240; ubiquitin; 5.
DR PRINTS; PR00348; UBIQUITIN.
DR SMART; SM00213; UBQ; 6.
DR SUPFAM; SSF54236; Ubiquitin-like; 6.
DR PROSITE; PS00299; UBIQUITIN_1; 4.
DR PROSITE; PS50053; UBIQUITIN_2; 5.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000054630}.
FT DOMAIN 190..232
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000259|PROSITE:PS50053"
FT DOMAIN 233..308
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000259|PROSITE:PS50053"
FT DOMAIN 681..756
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000259|PROSITE:PS50053"
FT DOMAIN 757..832
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000259|PROSITE:PS50053"
FT DOMAIN 833..938
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000259|PROSITE:PS50053"
SQ SEQUENCE 1010 AA; 112458 MW; 2D7C46976D6CA604 CRC64;
MSVTKFQMQA SKRWRAILYK APGQASGKII VSTNAGTWEN GAAVLTQQNG QSFGVTLEHV
VGNHNEIKFL AYNNVPPGMP NVKTKSNSKG VIIVQTTQNI DAASWIVHTV PGFPAAKTGY
SWPVAENAKG HLLLCLTISE SQINAIAASL LRAEPLVHYN DIPETETVGM QYFKKLSDGQ
FPTVPPYLSE GIPPDQQRLI FAGKQLEDGR TLSDYNIQKE STLHLVLRLR GGMQIFVKTL
TGKTITLEVE PSDTIENVKG KIQDKEGIPP DQQRLIFAGK QLEDGRTLSD YNIQKESTLH
LVLRLRGGMR NFGKTGQTAI LDVESSRTIG CVNIQFQNQL LVNENRGSFS ANWTIVARCQ
IVAFNHKIPN AGKQTVEVMA ILYKAPGQAS GKIIVSTNAG AWANGAAVLT QQAGQSFGVT
LEHVVGNHND IKFLAYNNLP PGMPNVNTKS NSKGVIIVRT TLNTDAASWI VHTVPGFPAA
KTGYSWPVAE NAKGHLLICL TISESQINAI AASLLRAEPL VHYNDIPETE TVGMQYFKKL
SDGQFPTVPP YLSRQSIKTA GQPAVTVNVY SKSATSRYEI YKRVIVKALK KTIKVWSRRD
NKLKGDCRVV ERNIRLIKSP ARVGDHDTNL DADLTNWAVS DPGNIFCLID RPYAKNQTVE
SGMAVCIDQA DIFARFNDIA AQIFVKTLTG KTITLEVEPL DSIENVKGKI QDKEGIPPDQ
QRLIFAGKQL EDGRTLSDYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVEPSDTIE
NVKSKIQDKE GIPPDQQRLI FAGKQLEDGR MLSDYNIQKE STLHLVLRLR GGMQIFVKTL
TGKTITLEVE PSDTIENVKG KIQDKEGIPP DQQRLIFAVE PSDTVENVKG KIQDKEGIPP
DQQRLIFAGK QLEDSRTLSD YNIQKESTLH LVLRLRGGCG IFCVMMVEIE IIFCCYIVCN
KNIWKRSSWL KGNLFHRCWK IMMWMVFDYL LPYDESWKLI VFQFADWILF
//
