ID A0A0V0TYB7_9BILA Unreviewed; 967 AA.
AC A0A0V0TYB7;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE RecName: Full=Pre-mRNA-processing factor 6 {ECO:0000256|ARBA:ARBA00020235};
DE AltName: Full=PRP6 homolog {ECO:0000256|ARBA:ARBA00032140};
DE AltName: Full=U5 snRNP-associated 102 kDa protein {ECO:0000256|ARBA:ARBA00031070};
GN Name=Prpf6 {ECO:0000313|EMBL:KRX44017.1};
GN ORFNames=T05_10643 {ECO:0000313|EMBL:KRX44017.1};
OS Trichinella murrelli.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=144512 {ECO:0000313|EMBL:KRX44017.1, ECO:0000313|Proteomes:UP000055048};
RN [1] {ECO:0000313|EMBL:KRX44017.1, ECO:0000313|Proteomes:UP000055048}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS417 {ECO:0000313|EMBL:KRX44017.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX44017.1}.
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DR EMBL; JYDJ01000105; KRX44017.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0TYB7; -.
DR STRING; 144512.A0A0V0TYB7; -.
DR Proteomes; UP000055048; Unassembled WGS sequence.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR010491; PRP1_N.
DR InterPro; IPR045075; Syf1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR11246; PRE-MRNA SPLICING FACTOR; 1.
DR PANTHER; PTHR11246:SF1; PRE-MRNA-PROCESSING FACTOR 6; 1.
DR Pfam; PF06424; PRP1_N; 1.
DR Pfam; PF14559; TPR_19; 1.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00386; HAT; 13.
DR SMART; SM00028; TPR; 4.
DR SUPFAM; SSF48452; TPR-like; 4.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000055048};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 26..184
FT /note="PRP1 splicing factor N-terminal"
FT /evidence="ECO:0000259|Pfam:PF06424"
FT REGION 39..111
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 136..163
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 51..75
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 76..93
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 967 AA; 109239 MW; CEB3F20499CE67D3 CRC64;
MNSNLTASVP GALVNKKRKH FIGMPAPVGY VAGVGRGATG FTTRSDIGPA REAGDVSDER
HPHQPRKKAT GPNGEERDEA EDEEEEDLND ANYDEFEGYG GSLFSKDPYD KDDEEADAVY
NLIDERQDEK RREYREKKLK KLIEDYRKER PKIQQEFSDL KRQLAVISDD DWANIPEVGD
VRNRRQRNPR AEKYTPVPDS VLSRFAYGDT TTTLDRRQMF GGLNTPFPGN ATSFSGMQTV
GPNVPGWMSG ISTNSSTDLD LRKIGQARNQ IMDMKLNQAS NYYVSDSVSG QTVVDPKGYL
TDLQSMIPSY GGDINDIKKA RLLLKSVRET NPNHPPAWIA SARLEEVVGK LQVARNIIMS
GCEVCHQSED IWLEAARLHP PETARAIIAQ AARHLPQSVR VWMRAAELES DSKLKKKVLR
KGLEHIPTSV RLWKTAVELE EPEDARILLS RAVECCPTSV DLWLALAKLE TYENARKVLN
RARENVPTDR LIWITAAKLE EANGNVSMVE KIIMRAVTSL RANLVEINRD QWLKDALEAE
KGGKILTCQA IVKAVLAIGI EEEDRKSTWI EDAETFAAQN AFACVRAVFA YALNVLPTKK
SVWLAAAHFE RKHGTKESLE ALLQDAVNNC PKAEILWLMY AKSKWLSNDV QGSRNILARA
FQANPNSEDI WLAAVKLESE NSEYERARLL LKKARDTAPT ARIWMKSAKL EWCLNELDEA
LDLIKQGVEM YPESEKLWMM VGQLYASKGD VESARKAYAE GLKHCSGCIA MWILAAQFEE
EQDCFIRARA LLEKARLKNP KNPSLWLAAI RIEQRGGFGE AALNLLARAL QDCPNAGLLW
AEAIQIESRP ARKSKSVDAL RKCEHDPHVL LAVSKLFWSE RKVNKAREWF NRTVKVEPDL
GDSWAYYYKF EQVHGTEEQQ NDVRNRCIQA EPRHGELWCS YSKNIANWRC SVGEILDKLV
QNLPIPN
//
