ID A0A0V0UJI0_9BILA Unreviewed; 713 AA.
AC A0A0V0UJI0;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE RecName: Full=Integrase catalytic domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=T09_14668 {ECO:0000313|EMBL:KRX51535.1};
OS Trichinella sp. T9.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=181606 {ECO:0000313|EMBL:KRX51535.1, ECO:0000313|Proteomes:UP000054681};
RN [1] {ECO:0000313|EMBL:KRX51535.1, ECO:0000313|Proteomes:UP000054681}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS409 {ECO:0000313|EMBL:KRX51535.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX51535.1}.
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DR EMBL; JYDN01000358; KRX51535.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0UJI0; -.
DR STRING; 181606.A0A0V0UJI0; -.
DR Proteomes; UP000054681; Unassembled WGS sequence.
DR GO; GO:0019899; F:enzyme binding; IEA:UniProt.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR PANTHER; PTHR37984:SF5; PROTEIN CBG26694; 1.
DR Pfam; PF13975; gag-asp_proteas; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 2.
DR SUPFAM; SSF50630; Acid proteases; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50158; ZF_CCHC; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000054681};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 32..197
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT DOMAIN 564..578
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 583..598
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 268..332
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 283..319
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 713
FT /evidence="ECO:0000313|EMBL:KRX51535.1"
SQ SEQUENCE 713 AA; 81006 MW; F9E9285402B54DED CRC64;
MNKDIEMKAQ SCEGCATAQK NPAKVAVKPW EVADRPWKRI RVDFAGPVNG KMFLIIVDAH
SKWPEVLHMP HITTEQTIES LKTVFARFGF PEVLVSDNGT QFTSTEFTIF CPENGIRHVT
SAPYHAQSNG QVERFIDTFK RALKKSTNDR RPRIFNDFSC YSAPEYKANA VCENLEEQKR
KMENTSRNRA DRQFKIGETV MVRDYTRDRK LWREGVIVGQ QGQVTWFVQV GSMRWKRHTN
QMRHRNTGIA DGVEEKDNEM GSLLDEALPA GKSPERNAAA DENVQDTETP NIFQQQTSTS
HKGSVDSPKA TVHAESSSTT VEPGDKERKP DVNSRRIVKE QLAEMTEQKT VLSAQQSTES
AQMMGTTRFP IGAHRPFNPE EGTWDTWILQ FRSYLEINFI NDSNLMRSCL LASLKPNAFE
ELRRSCLPTT PYDFTYDECV AKMKELYGRR VILMRERANF FRITQSDHQT PKQFANCLRE
AAGHCNFESF NTEAALVLQF INGMKNEEIK LRLLAKENIK LDEALSFLEM YEEIHGCSSR
VTMQECHAVK ETKGLKSGGV SNECHCCGEA GHFAKKCKFQ RSKCFKCGKQ GHLAKVCKHP
QKLGKSQKQR PQNSWKNHKL HADGIYAVKE RAHNFEVTVK INGKSTRMEL DTGAAVTIVT
PECWKSIGSP KLKRATVMLR SFTGHEVNLK GETMVTVEGD TGTRKLVLRV AKN
//