ID A0A0V0WFI7_9BILA Unreviewed; 854 AA.
AC A0A0V0WFI7;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 03-MAY-2023, entry version 25.
DE SubName: Full=U2 snRNP-associated SURP motif-containing protein {ECO:0000313|EMBL:KRX74620.1};
GN Name=U2SURP {ECO:0000313|EMBL:KRX74620.1};
GN ORFNames=T06_4422 {ECO:0000313|EMBL:KRX74620.1};
OS Trichinella sp. T6.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=92179 {ECO:0000313|EMBL:KRX74620.1, ECO:0000313|Proteomes:UP000054673};
RN [1] {ECO:0000313|EMBL:KRX74620.1, ECO:0000313|Proteomes:UP000054673}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS34 {ECO:0000313|EMBL:KRX74620.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX74620.1}.
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DR EMBL; JYDK01000142; KRX74620.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0WFI7; -.
DR Proteomes; UP000054673; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd21370; cwf21_SR140; 1.
DR Gene3D; 1.25.40.90; -; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 6.10.140.420; -; 1.
DR Gene3D; 1.10.10.790; Surp module; 1.
DR InterPro; IPR006569; CID_dom.
DR InterPro; IPR008942; ENTH_VHS.
DR InterPro; IPR013170; mRNA_splic_Cwf21_dom.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR047488; SR140_cwf21.
DR InterPro; IPR000061; Surp.
DR InterPro; IPR035967; SWAP/Surp_sf.
DR PANTHER; PTHR23140; RNA PROCESSING PROTEIN LD23810P; 1.
DR PANTHER; PTHR23140:SF0; U2 SNRNP-ASSOCIATED SURP MOTIF-CONTAINING PROTEIN; 1.
DR Pfam; PF04818; CID; 1.
DR Pfam; PF08312; cwf21; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF01805; Surp; 1.
DR SMART; SM01115; cwf21; 1.
DR SMART; SM00582; RPR; 1.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00648; SWAP; 1.
DR SUPFAM; SSF48464; ENTH/VHS domain; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF109905; Surp module (SWAP domain); 1.
DR PROSITE; PS51391; CID; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50128; SURP; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000054673};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 170..251
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 333..376
FT /note="SURP motif"
FT /evidence="ECO:0000259|PROSITE:PS50128"
FT DOMAIN 452..597
FT /note="CID"
FT /evidence="ECO:0000259|PROSITE:PS51391"
FT REGION 33..66
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 687..711
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 758..854
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 74..127
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 758..787
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 788..823
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 824..841
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 854 AA; 98126 MW; B322661F386C7BC3 CRC64;
MSSLLRYKAE EARRKKEEEM TREVLKEFEA TFQQTPSGDD RKAFTRGKGA NTPEIGPASS
KLPVQKVSKS SASFSLAEAR KQAEENAKKI LEANFKTRPQ KPGKKGEEKR LSNLETFKEE
LKKAQEERIV RRRMREQMQD QLGVTISPDT DGSLDSPYAK GNYDLDPTTS NLFLSNLSFS
VSENEIRELF GKFGPLASVK VLWPRSDEDR HKSRLTGFVA FMTRKDAQRA FSALKGVILH
GQEIKLSWGK PVTIPVYPVY VPDAMMKMIA PPPRSGLPFN AQPRRKDRDA YTWPLPEDLM
EPEDPVQQKM WRKMIKNAVV KVVIPTDRPL LCIIHRMIEF VVREGPLFEA MIMAKENKNP
MYSFLFDNTS AAHTYYRWKL FSILQGDSPA KWKTKKFRMF QNGSYWQPPP LNFFHNGMPE
ELYLENERIS GHCSTEEGGG DSSNFKSKRG QLCSAELVAL EKLLEKLTME RSRVGDAMVW
CVEHSDFAEH IVSVIADNIE NEDTVLPKKI ALLYLLSDIL ANCFAEVMNV SYYRTHIENR
LEGIFRKLHD SYKNISARLR AEQFRQRIAN CCKMWEDTAV YPLEFLARLQ GILLGIIPPE
PIPSDIDGVA LDETAAEELF DDYDIDGVPL DEDMMDTMAS STSAQQPKAK FIRSRWEEVA
PQLVKEQAFS SCKWELCDTE KQQDIFDTGV DGMPVDEKSR SPSHGKHELS EYERQQLREL
EVKVVTYQDA LESGSIALQE GMTIAEQVNN YRNYLLKKEE SKKQKKNEKR LRSSSGRSGD
SGKYRHRSHK RDHEHESRRL KRRHAHGRRS RSKSKKSSYK HSRRSKTSSS SPSSLTSSAP
RKSSVEHRDR HRRK
//
