ID A0A0V0XRE6_TRIPS Unreviewed; 317 AA.
AC A0A0V0XRE6;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 22-FEB-2023, entry version 18.
DE SubName: Full=Y-box factor-like protein {ECO:0000313|EMBL:KRX90582.1};
GN ORFNames=T4E_2357 {ECO:0000313|EMBL:KRX90582.1};
OS Trichinella pseudospiralis (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6337 {ECO:0000313|EMBL:KRX90582.1, ECO:0000313|Proteomes:UP000054815};
RN [1] {ECO:0000313|EMBL:KRX90582.1, ECO:0000313|Proteomes:UP000054815}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS141 {ECO:0000313|EMBL:KRX90582.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX90582.1}.
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DR EMBL; JYDU01000161; KRX90582.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0XRE6; -.
DR STRING; 6337.A0A0V0XRE6; -.
DR Proteomes; UP000054815; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR PANTHER; PTHR11544:SF60; LD37574P; 1.
DR Pfam; PF00313; CSD; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000054815}.
FT DOMAIN 24..93
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT REGION 129..169
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 189..317
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 234..253
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 279..293
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 317 AA; 35621 MW; 4AD6BB63E0639CD1 CRC64;
MEGKENEVNS TAKQTQEKVY LGRGIKGKVK WFNVKNGYGF INRLDTGEDI FVHQTAIIKN
NPNKYLRSLG DEEMVEFDVV DGSKGPEAAN VTGPKGQPVV GSKYAADRAL HFRGRRDYGQ
LYFRRPRGRG AAAHVTNDAT ATEQEEEDGH DGEGEQVMQR RRARTFRGGR RASRFAVREG
QFSRNVPSLR VSRGRGRGGA VRGGFSRYQG GYERGYRGRG RGRIIYRPRG RGRGNGPSNE
ERGEQERHLD SANTDVSESA VQEESTVQKL EEKDENSNNT SKAILNLQQQ FPAKQPMIME
KRSSRKRQVR MLNNAAA
//
