ID A0A0V0YM97_TRIPS Unreviewed; 512 AA.
AC A0A0V0YM97;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=Homeobox protein Hox-B1 {ECO:0000313|EMBL:KRY01275.1};
DE Flags: Fragment;
GN Name=HOXB1 {ECO:0000313|EMBL:KRY01275.1};
GN ORFNames=T4E_2647 {ECO:0000313|EMBL:KRY01275.1};
OS Trichinella pseudospiralis (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6337 {ECO:0000313|EMBL:KRY01275.1, ECO:0000313|Proteomes:UP000054815};
RN [1] {ECO:0000313|EMBL:KRY01275.1, ECO:0000313|Proteomes:UP000054815}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS141 {ECO:0000313|EMBL:KRY01275.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY01275.1}.
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DR EMBL; JYDU01000004; KRY01275.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0YM97; -.
DR STRING; 6337.A0A0V0YM97; -.
DR Proteomes; UP000054815; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR020479; Homeobox_metazoa.
DR InterPro; IPR000047; HTH_motif.
DR InterPro; IPR046327; HXA1/B1/D1.
DR PANTHER; PTHR45946; HOMEOBOX PROTEIN ROUGH-RELATED; 1.
DR PANTHER; PTHR45946:SF4; HOMEOBOX PROTEIN ROUGH-RELATED; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR PRINTS; PR00024; HOMEOBOX.
DR PRINTS; PR00031; HTHREPRESSR.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000054815}.
FT DOMAIN 344..404
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 346..405
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 253..274
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 286..346
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 485..512
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 286..300
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 310..346
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 485..506
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRY01275.1"
SQ SEQUENCE 512 AA; 53556 MW; 8952B69BA5037874 CRC64;
LSQILMSCEM IFKKVHERGS GGGGGGGGGG YASGNGNYLL YNRNSLNAAI EEAPQSTVVE
QQSQSLPTSP PATLPSYVSN FDDAKSNTSP PTAAVACAST AEENSNTAFY HQFNHPDQQQ
RRCQANLFTC TNAPSSSVPS STSTPSSTLD CSHLKFNQPS NIVCPPTTAI TKLTTTTTTS
ALRLCQYETP STVVVCSNLP YTVANSINSS SSGAVNGTTV DYNNHRPPYG SSNSIAIYTG
TADLTLANSC SSSSSSSSSS SSCNPGQSST TYKWMQIRRS APRIVNVNGS PENSISTKCG
GGGANLAGPS KRRCSSSISS ANDQGTMVEG NSNNNNNNSN SVCTTAVPNR TNFTTKQLTE
LEKEFHTNRY LTRARRIEIA SQLGLNETQV KIWFQNRRMK QKKHLKEKGF AAAAAAAAAL
LPSSSSHASS ASSSSASSSA SNCCSASSSS MVIGSALAAV AAAAHPSSVV VPSVSELFSS
PLLHSPQHSL HAQRQQHQST TSKDGNLHFA KL
//
