ID A0A0V1CMV9_TRIBR Unreviewed; 1476 AA.
AC A0A0V1CMV9;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE SubName: Full=Protein sel-1-like protein 1 {ECO:0000313|EMBL:KRY50645.1};
DE Flags: Fragment;
GN Name=TFB2M {ECO:0000313|EMBL:KRY50645.1};
GN ORFNames=T03_6397 {ECO:0000313|EMBL:KRY50645.1};
OS Trichinella britovi (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=45882 {ECO:0000313|EMBL:KRY50645.1, ECO:0000313|Proteomes:UP000054653};
RN [1] {ECO:0000313|EMBL:KRY50645.1, ECO:0000313|Proteomes:UP000054653}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS120 {ECO:0000313|EMBL:KRY50645.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sel-1 family.
CC {ECO:0000256|ARBA:ARBA00038101}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY50645.1}.
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DR EMBL; JYDI01000145; KRY50645.1; -; Genomic_DNA.
DR Proteomes; UP000054653; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:InterPro.
DR GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR005324; Ribosomal_uS5_C.
DR InterPro; IPR048584; Ribosomal_uS5m_N.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR InterPro; IPR006597; Sel1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR11102:SF147; FIBRONECTIN TYPE-II DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11102; SEL-1-LIKE PROTEIN; 1.
DR Pfam; PF03719; Ribosomal_S5_C; 1.
DR Pfam; PF21251; S5p_N; 1.
DR Pfam; PF08238; Sel1; 10.
DR SMART; SM00671; SEL1; 12.
DR SUPFAM; SSF81901; HCP-like; 3.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000054653};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 9..27
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 668..776
FT /note="Small ribosomal subunit protein uS5m N-terminal"
FT /evidence="ECO:0000259|Pfam:PF21251"
FT DOMAIN 861..930
FT /note="Small ribosomal subunit protein uS5 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF03719"
FT REGION 50..83
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 59..75
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1476
FT /evidence="ECO:0000313|EMBL:KRY50645.1"
SQ SEQUENCE 1476 AA; 167258 MW; BADEDB6A7531A5F2 CRC64;
MKTVNFNRVF FVFYVFYFAT LIGNLLGNNR LESAVLDDAE IVTESDESKD VHSVPLYEQS
SEKVKNAQAE STPDIQTDHE TSESQVEFPK GKKYYEEALT HVTGNFFRNK ADMKRGYELL
TKAAEFDHTG ALEYLAFMYL FGDSAPWNVN KSKEIFLHLA KRGSPKGQTG LGFLYAAGLL
TNSSQADAVV LYNYAAIGGD PWAQMIMGYR YFTGTNVPQN CESALSHYRK VAKQVIDKVT
FSGFISSQRI YLSDEMADLN ANSQAIIEEN MLQYYKFLAD KGDRNSQIGL ANLYLSGARG
IEQNVYLAYH YYLTAATAGS GTALAFLGKM YLDGTPATPA DPTTAFQYFS KAADKVVLGN
TLGYSGLGHM YYTGRGTEQN FSKAFKYFNL AAEQGSPEGQ VYLGTMYYHG WGVTQNLPAA
LKLFHLASQS GNVVAYYNLG QMHAMGLGVA RSCSTAVEFY KNVAERGVWS TMLMDAYLAY
QNGLYDQSVV QYLFMAELGY ETAQTNAAYI LDRGQLIYLS KNSINQRAFL LWKHSAEQGN
GFSRVRVGDY HYYGIGTPVN YEEAAANYKT ATELQRNPQA MFNLGYMHEK GIGIKQDLHL
AKRFYDMALE VSADAALPVT LALVKLTILF TLEKLQHGEW WRLEFMESTF GSFWDLYIIT
AIGASISSAE RLWKSVTSVS NVGRRKGRAR SVRKAKDLNR GQTIGSGKIN TLWPGLNSAL
TIGRQMLEPK YLPPDPEREQ KLLKLREVTR VSRLKLHPLE RGWSGTSLKG RKLGPPPCIA
EHSCSGNESG ASHDCEAWSS EADHCTMLLL LLFFFIIFGF AFAKMLESKA ALRKASNMAA
KRLRYIERFD NHTIYQDFWA ECRSTQIFAQ RMPEGYGLRC HRALKSICEL VGIKNLYAKV
EGNTRCYQSL TKAFFTGLLN QETYQQLADR KRLLVVEFAK EKDYFPKVIA RPSGDESVRR
DSEIDKDEVL DVDDLYGEGR YPYKRPKRKP FWINQAGYLH KLWKEHPKRN MDEVKIRLLA
EGIIADDTVE SRVLRRDQEQ RLVVEGEIPL PIGIGLSEVF VLGCGSEKIE QNITNEIYFA
CLGFTEQVQN VSCCSEADGM FANVFRFVPA GQSVHAEAEK SEKNTQSCVQ FDRIIDQCSS
RISESETVFC LFNPGASDLP LKLFEAGAKK MIILESDIEF VSHWQRFARQ NKSRVWTYNF
DFGRLNELTV KFFRKNHVYP LHGFLEACAI NPDPQWTATG EPTATNRDPP VMYIGVLPPF
NERSTFLCLL ANRMMRQNAF AFGPSEMLAF VSAPKYILLR ADDVKLPKMT RYRCLHYHLY
FDFQHILTEP ISTFYPSISV PKKIQYSSLV EKTSLDVNSL YLVHMKPKLK LPIKTDNRND
LSVDHVLSGL SFFHRQLTAS PKNTTIEEFL SNLLPGVRPY LENFGYDFSQ KLQSIPMEQI
LSMYQKIIDW PGYTESGCKG EVDDWLEMIW TSPAKS
//