ID A0A0V1CTR7_TRIBR Unreviewed; 529 AA.
AC A0A0V1CTR7;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=Autophagy-related protein 16-1 {ECO:0000313|EMBL:KRY52682.1};
DE Flags: Fragment;
GN Name=ATG16L1 {ECO:0000313|EMBL:KRY52682.1};
GN ORFNames=T03_12992 {ECO:0000313|EMBL:KRY52682.1};
OS Trichinella britovi (Parasitic roundworm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=45882 {ECO:0000313|EMBL:KRY52682.1, ECO:0000313|Proteomes:UP000054653};
RN [1] {ECO:0000313|EMBL:KRY52682.1, ECO:0000313|Proteomes:UP000054653}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS120 {ECO:0000313|EMBL:KRY52682.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the WD repeat ATG16 family.
CC {ECO:0000256|ARBA:ARBA00009271}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY52682.1}.
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DR EMBL; JYDI01000100; KRY52682.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1CTR7; -.
DR Proteomes; UP000054653; Unassembled WGS sequence.
DR GO; GO:0000045; P:autophagosome assembly; IEA:InterPro.
DR GO; GO:0043170; P:macromolecule metabolic process; IEA:UniProt.
DR GO; GO:0006807; P:nitrogen compound metabolic process; IEA:UniProt.
DR GO; GO:0044238; P:primary metabolic process; IEA:UniProt.
DR CDD; cd22887; Atg16_CCD; 1.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 1.20.5.170; -; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR045160; ATG16.
DR InterPro; IPR013923; Autophagy-rel_prot_16_dom.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19878; AUTOPHAGY PROTEIN 16-LIKE; 1.
DR PANTHER; PTHR19878:SF8; AUTOPHAGY-RELATED 16, ISOFORM F; 1.
DR Pfam; PF08614; ATG16; 1.
DR Pfam; PF00400; WD40; 4.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000054653};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 7..187
FT /note="Autophagy-related protein 16"
FT /evidence="ECO:0000259|Pfam:PF08614"
FT REPEAT 245..278
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 289..330
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 331..371
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 471..500
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT COILED 56..153
FT /evidence="ECO:0000256|SAM:Coils"
FT NON_TER 529
FT /evidence="ECO:0000313|EMBL:KRY52682.1"
SQ SEQUENCE 529 AA; 59829 MW; D89599007B53237F CRC64;
MSYRDVIFDQ LKCRNQSMND AYMDIYLSYS ELFDAVSHLK SVIKRLSTTD GKGGENEIDK
EKIRTLETQL LELQQERADL YKKRGENAEM LIELNRKLEE KEDERLHALK QLECNLEEKQ
KLEAENRKLK ENLENMTKNN QLLKDEHVVL QSTLTVLEGQ FQALKVENAQ MLDRWKLLNQ
READVLNLEN DLQMQMRSLK LQYELAEAAE PFVQIDDMEN IKDSPSPSIS DSSGSFVPKS
LKCKFEAHDG EVLTLCWGRC GKILATGGTD RRLKLWEIVD GQHGRPATLM GCNQAVTCAD
FDLNGSLVLA GSNDFATRIW SVADQRLRHS LTGHSGKVLC AKFVTGGRVI TGSHDRTIRI
WDLQGRSCYR TLLSASTCYD LVAVGNSQSM LISGHFDKKI RFWDDRCQHV VKDMQVGGKI
TSLDIANDDV NLLCTTREDL IYCIDLRQCL VKRSFGADGF KIGYDFVRGK FSPDSHYCIC
GSADGNVYIW NAMSGKLETV LTNGHSSCVI ASMWNLDGTV VATCEKQKV
//