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Database: UniProt
Entry: A0A0V1CTR7_TRIBR
LinkDB: A0A0V1CTR7_TRIBR
Original site: A0A0V1CTR7_TRIBR 
ID   A0A0V1CTR7_TRIBR        Unreviewed;       529 AA.
AC   A0A0V1CTR7;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   24-JAN-2024, entry version 25.
DE   SubName: Full=Autophagy-related protein 16-1 {ECO:0000313|EMBL:KRY52682.1};
DE   Flags: Fragment;
GN   Name=ATG16L1 {ECO:0000313|EMBL:KRY52682.1};
GN   ORFNames=T03_12992 {ECO:0000313|EMBL:KRY52682.1};
OS   Trichinella britovi (Parasitic roundworm).
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=45882 {ECO:0000313|EMBL:KRY52682.1, ECO:0000313|Proteomes:UP000054653};
RN   [1] {ECO:0000313|EMBL:KRY52682.1, ECO:0000313|Proteomes:UP000054653}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS120 {ECO:0000313|EMBL:KRY52682.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the WD repeat ATG16 family.
CC       {ECO:0000256|ARBA:ARBA00009271}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRY52682.1}.
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DR   EMBL; JYDI01000100; KRY52682.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0V1CTR7; -.
DR   Proteomes; UP000054653; Unassembled WGS sequence.
DR   GO; GO:0000045; P:autophagosome assembly; IEA:InterPro.
DR   GO; GO:0043170; P:macromolecule metabolic process; IEA:UniProt.
DR   GO; GO:0006807; P:nitrogen compound metabolic process; IEA:UniProt.
DR   GO; GO:0044238; P:primary metabolic process; IEA:UniProt.
DR   CDD; cd22887; Atg16_CCD; 1.
DR   CDD; cd00200; WD40; 1.
DR   Gene3D; 1.20.5.170; -; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR   InterPro; IPR045160; ATG16.
DR   InterPro; IPR013923; Autophagy-rel_prot_16_dom.
DR   InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR19878; AUTOPHAGY PROTEIN 16-LIKE; 1.
DR   PANTHER; PTHR19878:SF8; AUTOPHAGY-RELATED 16, ISOFORM F; 1.
DR   Pfam; PF08614; ATG16; 1.
DR   Pfam; PF00400; WD40; 4.
DR   PRINTS; PR00320; GPROTEINBRPT.
DR   SMART; SM00320; WD40; 5.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 2.
DR   PROSITE; PS50082; WD_REPEATS_2; 4.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000054653};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}.
FT   DOMAIN          7..187
FT                   /note="Autophagy-related protein 16"
FT                   /evidence="ECO:0000259|Pfam:PF08614"
FT   REPEAT          245..278
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          289..330
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          331..371
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          471..500
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   COILED          56..153
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   NON_TER         529
FT                   /evidence="ECO:0000313|EMBL:KRY52682.1"
SQ   SEQUENCE   529 AA;  59829 MW;  D89599007B53237F CRC64;
     MSYRDVIFDQ LKCRNQSMND AYMDIYLSYS ELFDAVSHLK SVIKRLSTTD GKGGENEIDK
     EKIRTLETQL LELQQERADL YKKRGENAEM LIELNRKLEE KEDERLHALK QLECNLEEKQ
     KLEAENRKLK ENLENMTKNN QLLKDEHVVL QSTLTVLEGQ FQALKVENAQ MLDRWKLLNQ
     READVLNLEN DLQMQMRSLK LQYELAEAAE PFVQIDDMEN IKDSPSPSIS DSSGSFVPKS
     LKCKFEAHDG EVLTLCWGRC GKILATGGTD RRLKLWEIVD GQHGRPATLM GCNQAVTCAD
     FDLNGSLVLA GSNDFATRIW SVADQRLRHS LTGHSGKVLC AKFVTGGRVI TGSHDRTIRI
     WDLQGRSCYR TLLSASTCYD LVAVGNSQSM LISGHFDKKI RFWDDRCQHV VKDMQVGGKI
     TSLDIANDDV NLLCTTREDL IYCIDLRQCL VKRSFGADGF KIGYDFVRGK FSPDSHYCIC
     GSADGNVYIW NAMSGKLETV LTNGHSSCVI ASMWNLDGTV VATCEKQKV
//
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