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Database: UniProt
Entry: A0A0V1LSJ1_9BILA
LinkDB: A0A0V1LSJ1_9BILA
Original site: A0A0V1LSJ1_9BILA 
ID   A0A0V1LSJ1_9BILA        Unreviewed;       845 AA.
AC   A0A0V1LSJ1;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   27-MAR-2024, entry version 17.
DE   SubName: Full=Nuclear export mediator factor Nemf {ECO:0000313|EMBL:KRZ62495.1};
GN   Name=Nemf {ECO:0000313|EMBL:KRZ62495.1};
GN   ORFNames=T02_4172 {ECO:0000313|EMBL:KRZ62495.1};
OS   Trichinella nativa.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=6335 {ECO:0000313|EMBL:KRZ62495.1, ECO:0000313|Proteomes:UP000054721};
RN   [1] {ECO:0000313|EMBL:KRZ62495.1, ECO:0000313|Proteomes:UP000054721}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS10 {ECO:0000313|EMBL:KRZ62495.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the NEMF family.
CC       {ECO:0000256|ARBA:ARBA00008318}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRZ62495.1}.
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DR   EMBL; JYDW01000008; KRZ62495.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0V1LSJ1; -.
DR   STRING; 6335.A0A0V1LSJ1; -.
DR   Proteomes; UP000054721; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0072344; P:rescue of stalled ribosome; IEA:UniProt.
DR   Gene3D; 2.30.310.10; ibrinogen binding protein from staphylococcus aureus domain; 1.
DR   InterPro; IPR021846; NFACT-C.
DR   InterPro; IPR008532; NFACT_RNA-bd.
DR   PANTHER; PTHR15239; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR   PANTHER; PTHR15239:SF6; RIBOSOME QUALITY CONTROL COMPLEX SUBUNIT NEMF; 1.
DR   Pfam; PF11923; NFACT-C; 1.
DR   Pfam; PF05670; NFACT-R_1; 1.
DR   Pfam; PF05833; NFACT_N; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Reference proteome {ECO:0000313|Proteomes:UP000054721}.
FT   DOMAIN          493..604
FT                   /note="NFACT RNA-binding"
FT                   /evidence="ECO:0000259|Pfam:PF05670"
FT   DOMAIN          742..834
FT                   /note="NFACT protein C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF11923"
FT   REGION          697..732
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          292..336
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        697..718
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   845 AA;  96182 MW;  90CD6C322BF6E057 CRC64;
     MKGRFSLIDL LAVVQELRQY IGMRLNLIYD INTKTYLLKL SKPDKKVMII FESGIRLHST
     DYGWSKNIMP SGFTMKLRKH LRDKRLEDIS VVGLDRIVDM RFGNGPTACH LIIELYDRGN
     VVLTDSEYVI LNILRARTIE ADNVRYAVRE TYVVEVREFE EYRRTADEEM ASRLLHACQP
     GDTLHKCLVP HFPYGPVLLE HCLLENKLSL RMKVQAVIGD QSLVSALALS LSLAFELFEK
     ICNEPSRGYL KMTVEENAAG ERIEIFHEFH PYFFSQFANS ECKQFDTFNG AVDEYFSKLD
     SQKCQQKQLQ QERAVLKRLE NVRQDHEQRL ANLQADQMLK ERMAVAVELN SETVEQALAV
     LRSAIAMKLE WFQINEMIQD ARDLGDPVAG KIVRLCLERN AFVMRLPVDV FDDDQELGDA
     ETVDVEIDLA LSSHQNSRRW FSQMKESALK QKKTIAAGGK ALKSAELRTK EQLKSTRQKT
     NIGKVRKMFW FEKFHWFFSS DRLLVIAGRD AKQNEILVKR YLKPGDLYVH ADLRGAASVV
     IKQSEDKGPI PPKTLNEAAA LAVCLSAAWE SKVVTSAWWV KHDQVSKSAP SGEYLKTGGF
     MIRGKKNYLT ASQLVMGFGL LFRLDSESAA RHLEKRCQAE DGLDGEEANC DNFHDEQNKQ
     RKLVTSELSE QSFNSVNSEE FSYPDVEIPL DGLKLESEKE TQHEEEEEKE FGKATAAAVE
     EEEEEDADDD EDEGYDVNVV QNETLDAIQC LTGNPTEDDN ILFALPVCAP YAALSNYKFK
     VKLTPGTTKK GKAIKTAIDL FMQDRTALPG LREFIKVIQE QDVARDFPGK VKVSAPNLHS
     VRKKR
//
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