ID A0A0V1LSJ1_9BILA Unreviewed; 845 AA.
AC A0A0V1LSJ1;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=Nuclear export mediator factor Nemf {ECO:0000313|EMBL:KRZ62495.1};
GN Name=Nemf {ECO:0000313|EMBL:KRZ62495.1};
GN ORFNames=T02_4172 {ECO:0000313|EMBL:KRZ62495.1};
OS Trichinella nativa.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6335 {ECO:0000313|EMBL:KRZ62495.1, ECO:0000313|Proteomes:UP000054721};
RN [1] {ECO:0000313|EMBL:KRZ62495.1, ECO:0000313|Proteomes:UP000054721}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS10 {ECO:0000313|EMBL:KRZ62495.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the NEMF family.
CC {ECO:0000256|ARBA:ARBA00008318}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ62495.1}.
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DR EMBL; JYDW01000008; KRZ62495.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1LSJ1; -.
DR STRING; 6335.A0A0V1LSJ1; -.
DR Proteomes; UP000054721; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0072344; P:rescue of stalled ribosome; IEA:UniProt.
DR Gene3D; 2.30.310.10; ibrinogen binding protein from staphylococcus aureus domain; 1.
DR InterPro; IPR021846; NFACT-C.
DR InterPro; IPR008532; NFACT_RNA-bd.
DR PANTHER; PTHR15239; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR PANTHER; PTHR15239:SF6; RIBOSOME QUALITY CONTROL COMPLEX SUBUNIT NEMF; 1.
DR Pfam; PF11923; NFACT-C; 1.
DR Pfam; PF05670; NFACT-R_1; 1.
DR Pfam; PF05833; NFACT_N; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000054721}.
FT DOMAIN 493..604
FT /note="NFACT RNA-binding"
FT /evidence="ECO:0000259|Pfam:PF05670"
FT DOMAIN 742..834
FT /note="NFACT protein C-terminal"
FT /evidence="ECO:0000259|Pfam:PF11923"
FT REGION 697..732
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 292..336
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 697..718
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 845 AA; 96182 MW; 90CD6C322BF6E057 CRC64;
MKGRFSLIDL LAVVQELRQY IGMRLNLIYD INTKTYLLKL SKPDKKVMII FESGIRLHST
DYGWSKNIMP SGFTMKLRKH LRDKRLEDIS VVGLDRIVDM RFGNGPTACH LIIELYDRGN
VVLTDSEYVI LNILRARTIE ADNVRYAVRE TYVVEVREFE EYRRTADEEM ASRLLHACQP
GDTLHKCLVP HFPYGPVLLE HCLLENKLSL RMKVQAVIGD QSLVSALALS LSLAFELFEK
ICNEPSRGYL KMTVEENAAG ERIEIFHEFH PYFFSQFANS ECKQFDTFNG AVDEYFSKLD
SQKCQQKQLQ QERAVLKRLE NVRQDHEQRL ANLQADQMLK ERMAVAVELN SETVEQALAV
LRSAIAMKLE WFQINEMIQD ARDLGDPVAG KIVRLCLERN AFVMRLPVDV FDDDQELGDA
ETVDVEIDLA LSSHQNSRRW FSQMKESALK QKKTIAAGGK ALKSAELRTK EQLKSTRQKT
NIGKVRKMFW FEKFHWFFSS DRLLVIAGRD AKQNEILVKR YLKPGDLYVH ADLRGAASVV
IKQSEDKGPI PPKTLNEAAA LAVCLSAAWE SKVVTSAWWV KHDQVSKSAP SGEYLKTGGF
MIRGKKNYLT ASQLVMGFGL LFRLDSESAA RHLEKRCQAE DGLDGEEANC DNFHDEQNKQ
RKLVTSELSE QSFNSVNSEE FSYPDVEIPL DGLKLESEKE TQHEEEEEKE FGKATAAAVE
EEEEEDADDD EDEGYDVNVV QNETLDAIQC LTGNPTEDDN ILFALPVCAP YAALSNYKFK
VKLTPGTTKK GKAIKTAIDL FMQDRTALPG LREFIKVIQE QDVARDFPGK VKVSAPNLHS
VRKKR
//