ID A0A0V1MX95_9BILA Unreviewed; 893 AA.
AC A0A0V1MX95;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 08-NOV-2023, entry version 23.
DE RecName: Full=Small ribosomal subunit protein mS39 {ECO:0000256|ARBA:ARBA00035134};
GN Name=QDPR {ECO:0000313|EMBL:KRZ76372.1};
GN ORFNames=T10_8127 {ECO:0000313|EMBL:KRZ76372.1};
OS Trichinella papuae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=268474 {ECO:0000313|EMBL:KRZ76372.1, ECO:0000313|Proteomes:UP000054843};
RN [1] {ECO:0000313|EMBL:KRZ76372.1, ECO:0000313|Proteomes:UP000054843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS1980 {ECO:0000313|EMBL:KRZ76372.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
CC -!- SIMILARITY: Belongs to the mitochondrion-specific ribosomal protein
CC mS39 family. {ECO:0000256|ARBA:ARBA00008551}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ76372.1}.
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DR EMBL; JYDO01000029; KRZ76372.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1MX95; -.
DR STRING; 268474.A0A0V1MX95; -.
DR Proteomes; UP000054843; Unassembled WGS sequence.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR GO; GO:0043024; F:ribosomal small subunit binding; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0032543; P:mitochondrial translation; IEA:InterPro.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR CDD; cd05334; DHPR_SDR_c_like; 1.
DR Gene3D; 3.40.50.720; NAD(P)-binding Rossmann-like Domain; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR037387; PTCD3.
DR InterPro; IPR020904; Sc_DH/Rdtase_CS.
DR InterPro; IPR002347; SDR_fam.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 1.
DR PANTHER; PTHR16276; PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3; 1.
DR PANTHER; PTHR16276:SF1; PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3, MITOCHONDRIAL; 1.
DR Pfam; PF00106; adh_short; 1.
DR Pfam; PF13812; PPR_3; 2.
DR SUPFAM; SSF51735; NAD(P)-binding Rossmann-fold domains; 1.
DR PROSITE; PS00061; ADH_SHORT; 1.
DR PROSITE; PS51375; PPR; 1.
PE 3: Inferred from homology;
KW Mitochondrion {ECO:0000256|ARBA:ARBA00023128};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Reference proteome {ECO:0000313|Proteomes:UP000054843};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT REPEAT 476..510
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 893 AA; 101082 MW; 2250697E2D9B7533 CRC64;
MAGRVIVYGG AGALGSKVVE HFAARNWWTC SIDLLKNDKA SCNIVVNDST DFILQGEEVV
SKVTDATANE KVDAILCLAG GWTGGSAKKK DFFLSCQQMW KQSVWTSVIS CRLGSLFLKT
EGLLVFTGAA AALQPTPTMM AYGMAKAAVQ QLARSAGCPA GGLPEKSTCL AILPVTLDTP
ANRKAMPKAD TSSWTQLSYI ADMISVWISD YGSRPKSGSL IKLTTVNGNT YESKSVENLI
FLQGCLDNPE KLLISKNAFP LDTLRCFIIR RCSIFVQESG TAAVSSENAL VIPDRIPRSH
TDLLESLAST VKDDPTAGHY AFMDDPYLIP SSTAAKRSYL LGKYSGKNAA RYFAREFPTL
FMLDYDEPRL NAFRPQKLPV EEKGSTEEDL IDRMRKIHVQ AAIVVYENAV KKGVQISQET
LLAFLEFLCY YNATQPNLEI SAERRWFGGN FHEISSKNWK ERGLAEKIFQ AIQPETPRAY
AAIISGLLKY NSYSKAEEMF RKMKEASLKP DIDLYNAMLH GVWQLRTDNR ERWQYCLQLL
NEMRDDDIQP DVQTFNTLLW ILKSMRFWKF SPKHTMEVYQ EMLHLDLEPT LTTYLCLVEI
FFKSPDFESL VEQIISRLRG KSLKAENKQD ELFFPKIMQR CCENAQSVET ANCIHEILTF
ENNTACIASF QAETVYYENY LTLVARHGSS FEEFFKYYDR FVPRNYSPNA RMFRELLHLV
DSTGSYEHLT RIWSEMLLHG QIAVRHDDLL LELLTLVTSD FAVSSAFERC KDDLARLSWN
TYNSILNGRG QVDANVIALL SLVSAQTAGE QEEAWTVIIR SLFFALEHTV TQVVNEEVGL
SRERVQGKPS VDVLEKLLLL LNSTDHPELY KKLQNMVESE RKQQINDENF DSD
//
