ID A0A0V1N5C3_9BILA Unreviewed; 798 AA.
AC A0A0V1N5C3;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE SubName: Full=RNA-binding motif protein, X-linked 2 {ECO:0000313|EMBL:KRZ79239.1};
DE Flags: Fragment;
GN Name=Rbmx2 {ECO:0000313|EMBL:KRZ79239.1};
GN ORFNames=T10_7341 {ECO:0000313|EMBL:KRZ79239.1};
OS Trichinella papuae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=268474 {ECO:0000313|EMBL:KRZ79239.1, ECO:0000313|Proteomes:UP000054843};
RN [1] {ECO:0000313|EMBL:KRZ79239.1, ECO:0000313|Proteomes:UP000054843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS1980 {ECO:0000313|EMBL:KRZ79239.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-
CC pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ79239.1}.
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DR EMBL; JYDO01000007; KRZ79239.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1N5C3; -.
DR Proteomes; UP000054843; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0007229; P:integrin-mediated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR CDD; cd12411; RRM_ist3_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 2.10.25.10; Laminin; 3.
DR Gene3D; 3.30.1680.10; ligand-binding face of the semaphorins, domain 2; 1.
DR Gene3D; 2.60.40.1510; ntegrin, alpha v. Chain A, domain 3; 1.
DR InterPro; IPR013111; EGF_extracell.
DR InterPro; IPR033760; Integrin_beta_N.
DR InterPro; IPR015812; Integrin_bsu.
DR InterPro; IPR002369; Integrin_bsu_VWA.
DR InterPro; IPR032695; Integrin_dom_sf.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR045844; RRM_Ist3-like.
DR PANTHER; PTHR10082; INTEGRIN BETA SUBUNIT; 1.
DR PANTHER; PTHR10082:SF60; INTEGRIN BETA-PS; 1.
DR Pfam; PF07974; EGF_2; 2.
DR Pfam; PF17205; PSI_integrin; 1.
DR Pfam; PF00076; RRM_1; 1.
DR PRINTS; PR01186; INTEGRINB.
DR SMART; SM00187; INB; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF57196; EGF/Laminin; 2.
DR SUPFAM; SSF69179; Integrin domains; 1.
DR SUPFAM; SSF103575; Plexin repeat; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS00243; INTEGRIN_BETA; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Integrin {ECO:0000256|ARBA:ARBA00023037};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000054843};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 754..777
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 41..119
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 158..217
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 158..173
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 174..189
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRZ79239.1"
SQ SEQUENCE 798 AA; 88064 MW; 65204589B54C42FB CRC64;
LIKMNPITNV KNLNKINERE LQLGLAGKSD RSWHQKYKDS AWIFVGGLPF QLSEGDIICV
FSQYGEIVQL NLIRDKKTGK SRGFCFLCYE DQRSTVLAVD NFNGIKLLGR IIRVDHVENY
RVPKERGDED EITKKLWLEG CAPSTSFAPV KEVPIKEEHS DDDFSEEAVI HKKKDSKKKH
KHKSKSKVKR ERSPSPLLEL DPSQVFQPSK EKKPTNPALL IEKERKALLL ASGEEIGMEK
LNERLNRLER KELPAFDLGE DFRVIVYWEE NPSTTVFTSV HGVIAVHYLL EKQKNVYIKI
SLLLFTDAIS GITMAPPTRC KPFFSLLASY FFCFLFATTI TDAKRSPAQL CKTTSAQISC
GQCIKQHPDC AWCADPNYDS ISRCEQYESL IQKCHREYVE HPTNQIDFPQ NAEIGSTRRD
PHSGANVRTQ LQPQQVSLAI KPGETVSFSL RYWHQDRDTR DIYVLNSETD SLGVSIEYEA
ECRGIVQPGN HCSSVSQSDT VMFNVSVRLK ECRSSGGSVI SVGIGGVREV VALYINPICS
CDCERLDSQV HISPQCGNRG NLVCGACVCL PGSAGSQCEC NVASGTVSAI ELLNQCRQSP
SDPPCSDRGQ CHCGSCTCDS PEIYSGKYCQ CDDTSCPSSG TELCSGHGRC ECGICKCESG
WSGSACDCPT DDMHCIAKNG LVCAGHGSCE CGECVCKDKY SGPTCEHCAD CEDEFSEHDD
DDYLRMLTDH NNGENGNQVD GSVISEPIAK DAPAAAAAAA SLLSANAALL VLHILLFSLV
NRRLTLLPTA ASWLGSIF
//
