ID   A0A0V1NE10_9BILA        Unreviewed;       808 AA.
AC   A0A0V1NE10;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   27-MAR-2024, entry version 21.
DE   SubName: Full=Transposon Ty3-I Gag-Pol polyprotein {ECO:0000313|EMBL:KRZ82239.1};
GN   Name=TY3B-I {ECO:0000313|EMBL:KRZ82239.1};
GN   ORFNames=T08_15323 {ECO:0000313|EMBL:KRZ82239.1};
OS   Trichinella sp. T8.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=92180 {ECO:0000313|EMBL:KRZ82239.1, ECO:0000313|Proteomes:UP000054924};
RN   [1] {ECO:0000313|EMBL:KRZ82239.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS272 {ECO:0000313|EMBL:KRZ82239.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRZ82239.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; JYDM01000328; KRZ82239.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0V1NE10; -.
DR   STRING; 92180.A0A0V1NE10; -.
DR   Proteomes; UP000054924; Unassembled WGS sequence.
DR   GO; GO:0042575; C:DNA polymerase complex; IEA:UniProt.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR   Gene3D; 1.10.340.70; -; 1.
DR   Gene3D; 3.10.20.370; -; 1.
DR   Gene3D; 3.30.70.270; -; 2.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR041588; Integrase_H2C2.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR000477; RT_dom.
DR   InterPro; IPR041577; RT_RNaseH_2.
DR   PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR   Pfam; PF17921; Integrase_H2C2; 1.
DR   Pfam; PF17919; RT_RNaseH_2; 1.
DR   Pfam; PF00665; rve; 1.
DR   Pfam; PF00078; RVT_1; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
DR   PROSITE; PS50878; RT_POL; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000054924}.
FT   DOMAIN          1..67
FT                   /note="Reverse transcriptase"
FT                   /evidence="ECO:0000259|PROSITE:PS50878"
FT   DOMAIN          451..616
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   REGION          726..808
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        760..789
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        792..808
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   808 AA;  92412 MW;  5DB8687D4E982622 CRC64;
     MDVALRGLTW SSCLAYLDDI IVFGRTAREH TDRLERVLQR IAETGLKLKP QKCHLMRKTV
     RFLGHVLSEN GISTDEEKIR AVKEWPTPCC PSEVRQFLGL ASYYRRFIKN FSMVSAPLNA
     LLRKGSHWKW TAECQTAFDQ LKHMLCTAPV LTFPDFNVPF IVDVDASAEG IGAVLSQPSH
     GNERVVAYAS RTLTKAERRY CVTRKELLAL VWSIKEFRPY LYGQQFDVRT DHSCLRWLRN
     FKEPEGQVAR WLEQLAEYDF NVLHRPGRAH CNADALSRQR CPQCGISFAA AATSPIAAKE
     EVSSSRCLPI ADIHTWLQAQ STDPTLSVLR NWLDANRWPR HCPTSSDPDL RSLWRDGRGV
     FRVDDNGLLR RRQASGDHVV DQLLVPKELR NDVLAAMHNS TFGGHFASRR TLDRLQRRYF
     WPRMRKAVDA WCQACRTCAA RNEPTRKAKA PLQMPETSCA FQTLAMDFLG PLEATPKGYR
     YILVVCDYFS KWTEAYPTRS QAATEVADAL VGNWFSRFGA PIRLHSDQGR SFESSLISEV
     CKIFGVEKTR SSPYHPQGNG LVERANRTLL NTLAKLCHES QDRSWDQLLP LATMAYNSTA
     HETTGQSPFC MLFGKQMSLP LDITLDAPPG TACNAEDYVV QLRENLQKVH SMAFERSRHE
     QQRHKEIADR KATANRFETD QLVWLKIPQK GKMDMRWSGP LRVVKQLGAE TYRVQDVRRP
     RRRLVVHSDR LKSYHTGTHQ DATTGGSEPP GGYGDVLRTT WTLKQPTVRP DTSRSQPQED
     VQGQAAEQNR PQRVRRPPRR FDDYVRYN
//