ID A0A0V1NNP7_9BILA Unreviewed; 3165 AA.
AC A0A0V1NNP7;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=Protein sidekick-like protein {ECO:0000313|EMBL:KRZ85576.1};
DE Flags: Fragment;
GN Name=rig-4 {ECO:0000313|EMBL:KRZ85576.1};
GN ORFNames=T08_9700 {ECO:0000313|EMBL:KRZ85576.1};
OS Trichinella sp. T8.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=92180 {ECO:0000313|EMBL:KRZ85576.1, ECO:0000313|Proteomes:UP000054924};
RN [1] {ECO:0000313|EMBL:KRZ85576.1, ECO:0000313|Proteomes:UP000054924}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS272 {ECO:0000313|EMBL:KRZ85576.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ85576.1}.
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DR EMBL; JYDM01000139; KRZ85576.1; -; Genomic_DNA.
DR STRING; 92180.A0A0V1NNP7; -.
DR Proteomes; UP000054924; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0032040; C:small-subunit processome; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR CDD; cd00063; FN3; 13.
DR CDD; cd00096; Ig; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 18.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR003961; FN3_dom.
DR InterPro; IPR036116; FN3_sf.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR013098; Ig_I-set.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR003598; Ig_sub2.
DR InterPro; IPR013151; Immunoglobulin.
DR InterPro; IPR007319; SSU_processome_Utp21.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22840; WD REPEAT-CONTAINING PROTEIN 36; 1.
DR PANTHER; PTHR22840:SF12; WD REPEAT-CONTAINING PROTEIN 36; 1.
DR Pfam; PF00041; fn3; 11.
DR Pfam; PF07679; I-set; 1.
DR Pfam; PF00047; ig; 1.
DR Pfam; PF13927; Ig_3; 1.
DR Pfam; PF04192; Utp21; 1.
DR Pfam; PF00400; WD40; 1.
DR PRINTS; PR00014; FNTYPEIII.
DR SMART; SM00060; FN3; 13.
DR SMART; SM00409; IG; 5.
DR SMART; SM00408; IGc2; 5.
DR SMART; SM00320; WD40; 10.
DR SUPFAM; SSF49265; Fibronectin type III; 8.
DR SUPFAM; SSF48726; Immunoglobulin; 6.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR PROSITE; PS50853; FN3; 13.
DR PROSITE; PS50835; IG_LIKE; 5.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000054924};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT TRANSMEM 28..47
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 2006..2029
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 62..145
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 266..353
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 355..446
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 452..534
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 535..618
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT DOMAIN 631..733
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 738..835
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 840..939
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 940..1036
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 1041..1136
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 1141..1270
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 1275..1372
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 1376..1470
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 1475..1572
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 1577..1677
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 1682..1777
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 1780..1876
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT DOMAIN 1877..1996
FT /note="Fibronectin type-III"
FT /evidence="ECO:0000259|PROSITE:PS50853"
FT REPEAT 2795..2836
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 2905..2950
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2912..2929
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRZ85576.1"
SQ SEQUENCE 3165 AA; 353087 MW; 6F1D1F1B9038976D CRC64;
LHRWRSFHDD RQRLSLVYRC HPAERKMTSF FSSFIVLIII IICLDFVDGN LVNGSELLLL
GPQLLSFEKR SLFVHEGAGF QLSCPVIEAD QRLQIQWFKN RRLISPVAGV PVLNLRNASK
FDAGSYFCKA TDQNGGILSE STQIFVSYFN PPPAPGKLIE VRAKVGGYAI FKPPSIDAAP
LYHLQWRWMF NNVLIAPSLR AFISSRGALV LLDVEPNDFG QYSLEVYHDT LKSRPVKYDY
WLEQDASGDL FESNIFAGTV SIVWKPHNQV FVKSQWSDEV IFECVPYHGS LENLNIVWKF
NQEIIDEQNL NYQLRNFRRQ LVVRNPTEDQ AGLYTCEASF SLFSTSQERA TLKAPRLLNS
LPNVTYANFG SDVDIHCSFD GGHNITWFYN GDDLTEPLQC CAKTIGLEKL SSDVLRVKKL
SRDQIGMYQC LAENSHGSAI DGTYVQGRTN APHIEQLSNV TASVGQDVTL SCDALGWPKP
TVQWYFNGIE VNGTNTGSGL LLLPKVEIKD AGWYTCVASN QFGVTDGRLY LNVQGKVKIL
KGPEDEAVVI GSSVVFPCQV TAEGTFTRQW FLKDQLLIPG AVRNVNFLPD GALSIQEVAP
INIGIYKCVV RSASGTVSQS GSLKIMEKPS MPLHVKAYVN NETLPAYVTL TWSQGFDGNS
PIIKYVVEQR MVGSQGALSE WEVAVDNIVK EQHEIKIDNL KPSSVYDFRV IAVNRYGYGM
PSVPSNRVSM PQQPPAAAPQ NVAGSARSAS DIMIQWQPPP ADQWNGDILG YIVRYRLANY
PDIPWNYHNI SDSRTRNWLI TDLITWREYE IQAAAFNERG MGVFSKSLYI TTLEGVPTDA
PLLTNVTVIN STAVFIKFNP PSQQMIPGVN LGYKVEAWLG EVGTKLAKSI KVLPYSLHAV
EATMSGLEKY ATYNITALCF TAPGDGPRSS PVQVTTDQDV PESVCDAKAE EIQFNFAEIT
WKPPKHPNGI LLNYTLVYWS LNDTSLNETV QLSADILRYK VQGLKPVTAY EVQIYASTAI
GDGPRSKLVF QTTVPPEMPG PPSRLAISNP RQRDVTLQFT PGYDGKTLIS RWIVEAMVGS
SSTWQEVYNV SDPHAKSLTV SGLRPFTNYT LRLLAENVVG RSPASVPSNR FTTLQAVPEF
APVDFDVQPI SSTSVRATWN PLPKHAWNGP PLGYLLFYTR NDTATATGGG GGNLFGDSEF
HTKEPIVFRI CHVLFLFVCL LQIVVKNPKS SEYVLKKLCK HCTYVFRLAA FNMIGRSELS
RSLVIKTYED TPSGAPQAVK ATPESPKSVV VTWQKIPENQ QNGHILGYRV EYRSISSPTD
IGHEVVNDES RLAVTLDGLR PYTDYRIKVA GITMVGIGVY SEPDLVIRTA EDVSEPPSEM
FFPYVTTNEV RLTWKPPYRP NGIVQRYEVS YWQNMTGEHD GVKTMLASDL RMFVATGLFP
MTLYTFSVAA VNSMGLGQRA LATVYTSQDR SLPQSPTRPE LALSKVQRSD AISIEWQNTA
NNARMPVRFY ELEIQHENGD SWMEWDEKVA AERATVDKLK PNAAYRFRVR SVNDHGKSPW
SVVSDWMRTL EAPPTEPPRE IEVFAFNASS VQVRWKAPER STWNADVVGY RILYKSYGEN
NTFRVKEFPM HDAYKREWDF LLSNLKRFRH YVVQLQTFNQ IGSSVASKPH FVYVAYSIPE
TAVTGLRAEP ISSTEANVSW DPWPADASPI NGFKVYYSRE TSENGTASEQ DVVEPEASFK
VLSGLSKFSS YKIDVVPFNR AGEGPKMQVT LRTLPDRPGP VQSLRFHDVL LDSVNISWTP
PSEPNGVIIG YRVTYKTYKL DKEFMSQRQE KVIGRQYLVV TNLEENVTVS FSVEAETVVG
YGPKVNGTVT IGPQPGSPEP PTTPIIIPSD SSLLIEWQSG EENLQSAPVD SFIVQYRGQN
GAMPIRRRRA ELLATESLLT KRWQTLAIID SSVNTYTVSY RQLKPGSTYT FRVVSRNKYG
VSYPSAPSDP FTVPEGFSDR PFYLEWWFLV ILALVLLVIV VIVVAVLWVT GNGKKCDHGR
SGSDTSLQLS DGGIVTYQLR ASKRNGSKVR KVPFGSGSHN NNSRYTRYPT LANDEITFTK
GSDMLGLKKR ETAEEKSAYY NWYASVNNLD ESHTSAKPTY TSAALLVDEP NMDPDVDSIA
QHYQTTDSCY RETWRRAKNA AVHRPLSASG EEDDAYVIRE EQLLSLDRNA SLNRVPPTAF
GFVICCAMMT GEESLLFASY RALGVVCNSD VPAVVRFLPQ SKTVLLYTSV GRAVHTYRCS
SMSLMAISQS LPSEVCSLAV GDPCERVYAG TMCGRVFILR FGRHIEREMH HHKAAVRHLL
ALGSHLISVD EQNHIVVSEV DSGEVFSTVP FDEKTFRVSA VCHPATYLNK LVFGSEQGTL
RLFNVKTSRV VYEFQGWHSA VVIMQQSPVI HVVAIGLANG RILVHNMKTD QTLLTFQHND
GPVSALAFRL DGQQALVSAS VTGSLIVWNL DAARLAAVRK FAHHGPINTL IAIPDEPSMI
TVGNDNAIKT WIFDGGAFVN PRQMNVREGH SKPPNYIRFH GSDGSELLSA SADGTLKMFN
TVTEQRNVNL GFASLVRRRV ANRRGSDFKK LRLPPIVHFS SQAAREFEWD DVVCCHEKFS
TVTTWSTRRG RLGSHKLQDK RLKKMPLASA TCCVISPCGN TALVGYSTGD VNIYNIQSGA
ARGSLVDSSG KAAHSFPLQG ICVDAFNQII VTGCTGGHLK MWNFRTRQCL HDETLDSGIC
QLVLNSDNNL IGIALDNLSL HLYDIYNRRT VRRFDKCHGN RITDLGFGPG GQWLISSSLD
CTIKVWDLAS ACLVDVLTFD DACRSFSISP NGQYMATAHC EQRGIYLWLN KTYYRPGIAL
RPLPLDYEPA TVFQLPGAAA CIDEEGTEVV EEQSTQQELT EQGGEQQQEK ENSPTEDSED
LQNQHHTGYS GRCSRDSLCA FSGLSESRWA NLPDLDMIRQ RNKPKQQLLK AGKAPFFLKS
IPGLVPSFDV EEEEQVQRSR LLKSPIAMSA SNCEASTFAN LLLAADDDAA YFTAFHHLQS
CNVSSVYTEL VNLGPESGAG SERLLLAFMR MAIAVLKTGR CFELINAQLS LFLQLHHQYL
WTKGDEQLKR LLRELLDAQQ SRWTRLDNLF SEVVCMLDFV KASLI
//
