ID A0A0V1PDV6_9BILA Unreviewed; 1400 AA.
AC A0A0V1PDV6;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Pre-mRNA branch site protein p14 {ECO:0000313|EMBL:KRZ94447.1};
GN Name=Sf3b14 {ECO:0000313|EMBL:KRZ94447.1};
GN ORFNames=T08_16120 {ECO:0000313|EMBL:KRZ94447.1};
OS Trichinella sp. T8.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=92180 {ECO:0000313|EMBL:KRZ94447.1, ECO:0000313|Proteomes:UP000054924};
RN [1] {ECO:0000313|EMBL:KRZ94447.1, ECO:0000313|Proteomes:UP000054924}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS272 {ECO:0000313|EMBL:KRZ94447.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ94447.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JYDM01000018; KRZ94447.1; -; Genomic_DNA.
DR STRING; 92180.A0A0V1PDV6; -.
DR Proteomes; UP000054924; Unassembled WGS sequence.
DR GO; GO:0005576; C:extracellular region; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008061; F:chitin binding; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd12241; RRM_SF3B14; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 2.170.140.10; Chitin binding domain; 4.
DR InterPro; IPR002557; Chitin-bd_dom.
DR InterPro; IPR036508; Chitin-bd_dom_sf.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR034150; SF3B6_RRM.
DR PANTHER; PTHR23301; CHITIN BINDING PERITROPHIN-A; 1.
DR PANTHER; PTHR23301:SF109; PROTEIN CBG16847; 1.
DR Pfam; PF01607; CBM_14; 5.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00494; ChtBD2; 11.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF57625; Invertebrate chitin-binding proteins; 8.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50940; CHIT_BIND_II; 7.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000054924};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 17..92
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 148..207
FT /note="Chitin-binding type-2"
FT /evidence="ECO:0000259|PROSITE:PS50940"
FT DOMAIN 725..779
FT /note="Chitin-binding type-2"
FT /evidence="ECO:0000259|PROSITE:PS50940"
FT DOMAIN 789..847
FT /note="Chitin-binding type-2"
FT /evidence="ECO:0000259|PROSITE:PS50940"
FT DOMAIN 1028..1085
FT /note="Chitin-binding type-2"
FT /evidence="ECO:0000259|PROSITE:PS50940"
FT DOMAIN 1196..1253
FT /note="Chitin-binding type-2"
FT /evidence="ECO:0000259|PROSITE:PS50940"
FT DOMAIN 1272..1329
FT /note="Chitin-binding type-2"
FT /evidence="ECO:0000259|PROSITE:PS50940"
FT DOMAIN 1342..1400
FT /note="Chitin-binding type-2"
FT /evidence="ECO:0000259|PROSITE:PS50940"
SQ SEQUENCE 1400 AA; 158728 MW; A475A600C58BE3BC CRC64;
MAMGRKANVR LPPEVNRILY VKNLPYKITG EEMYDIFGKY GAIRQIRVGN TPETRGTAFV
VYEDIFDAKN ACDHLSGFNV CNRYLVVLYY QANKAYLRMD TEKSKKELER VKAKYGLGVE
TEFLRKINFI ENNQFYKYSA FYRVDFVEFN CSSLSSGNFA DLNEICCAYY YTCNNGEAKR
TLCPDGLYYD KKSKTCKDKE EIAECNLCYL NKNENVPLSA CSSEYIFCHN TIPIRQWCFA
NEIFDIRTRL CTSRDRASGC LPNEFQFKNV HGLDNLCSEY DRQFKQVKEI QSCLPFFIEC
SNDNVRIMQC REFGTVFDDF YKTCIPKDLS FTCSGLDAKV NLLNSKEEKS GCPEKMFKRK
RRMIFQSDYA MHPLYGSILK KTNNSQTISI HPNGALEDFD LTKAVVNDNE RDRLKKGILF
GNENSHLYLD TDNLHFPSFQ SFNDKADDTL SNTDNNVRKL GCLKNLQQKN GYRFVPSNSD
DEIFSADLHA KMANADLADA QFPSRSQLGN DWDNKDILVA PKTDLNEICE MIRKSCESEQ
PDSSGYGNSL TDETNDKRRE KCNVEVTKCL QSLKSDNSTL FQQYHFPFRK LLNELCKNGD
VKFAVAPCSR FYVHCIEGAY GLKSCLENTS YNAQAGQCMP CTVSTVSATV VTTSETIKCV
GNFEILKDGL YEERACDHKT EHSSRKVFGQ RCVCQSGYLR LASESGSLCV SENYCRMHKV
AMTENKFCSG SKADFSSLVD CNEVYYRCQR NRTNFSFCNQ GQVFDLAKGR CVMRQLCSRK
MKPILTHLND LCIGRKDGAY SLITNLSYPT FYMCTYEMIV FSSCERGSLF DWSRKICMPM
KIQDCTDGIQ PKGHFEAGYS ICWGGMIYET ACSDGMVLKE VTDHGKIGYV CVEKKDFSNQ
GYPKSCYGKS DGFYLNLTSE TYFFCANHFA TYLNGENNFS FDCTESKSSA DNESISCEIS
YKLTNLTSFI KRLKAEQSQS FEVAPCEANY FTKKNSAMIL EKCAAGEVFV SLFQRCMKMS
TDGRCTRRIL CNGKMDAIYP ILPCHATYYI CFGGYRYEEN CPPGKVFSMH HQSCVAFLDD
PSCHWNSSSL LLPAKHCSEF GNCQPVYQNC IIEGQIMNIT CGDGNVYDIS LKQCVRKTHC
SMESYTTTTT ASSSFSAGTS HASISPLVVG STVDFETSPI VDSTESVDVG KSFVITNACK
NKPNGSYPIK GNCKQFLSCS NEISYVMECP ANTVYNAKIA NCGHPEDVPD CQSYIVNEKL
TRDVSRAASW MKTFCADKAD GYYRHFNRCD QFIQCLKRRK IILSCTKGLV FNPTMKVCDL
PRRVPECNII LNNLVEKESA PDDYCKGIEH GAFTKDPNNC GRFYRCVHGK AHRFDCPPNL
VFNPKLNTCD WLSNVSGCAV
//
