ID A0A0W8D3L8_PHYNI Unreviewed; 894 AA.
AC A0A0W8D3L8;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE SubName: Full=U2 snRNP-associated SURP motif-containing protein {ECO:0000313|EMBL:KUF90776.1};
GN ORFNames=AM587_10010521 {ECO:0000313|EMBL:KUF90776.1};
OS Phytophthora nicotianae (Buckeye rot agent).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=4790 {ECO:0000313|EMBL:KUF90776.1, ECO:0000313|Proteomes:UP000052943};
RN [1] {ECO:0000313|EMBL:KUF90776.1, ECO:0000313|Proteomes:UP000052943}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=race 0 {ECO:0000313|Proteomes:UP000052943};
RA Liu H., Ma X., Yu H., Fang D., Li Y., Wang X., Wang W., Dong Y., Xiao B.;
RT "Genomes and virulence difference between two physiological races of
RT Phytophthora nicotianae.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KUF90776.1}.
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DR EMBL; LNFO01001521; KUF90776.1; -; Genomic_DNA.
DR STRING; 4790.A0A0W8D3L8; -.
DR EnsemblProtists; KUF90776; KUF90776; AM587_10010521.
DR OMA; FKSRVCN; -.
DR Proteomes; UP000052943; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd12223; RRM_SR140; 1.
DR Gene3D; 1.25.40.90; -; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.10.10.790; Surp module; 1.
DR InterPro; IPR006569; CID_dom.
DR InterPro; IPR008942; ENTH_VHS.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR035009; SR140_RRM.
DR InterPro; IPR000061; Surp.
DR InterPro; IPR035967; SWAP/Surp_sf.
DR PANTHER; PTHR23140; RNA PROCESSING PROTEIN LD23810P; 1.
DR PANTHER; PTHR23140:SF0; U2 SNRNP-ASSOCIATED SURP MOTIF-CONTAINING PROTEIN; 1.
DR Pfam; PF04818; CID; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF01805; Surp; 1.
DR SMART; SM00582; RPR; 1.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00648; SWAP; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF109905; Surp module (SWAP domain); 1.
DR PROSITE; PS51391; CID; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50128; SURP; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000052943};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 179..260
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 315..358
FT /note="SURP motif"
FT /evidence="ECO:0000259|PROSITE:PS50128"
FT DOMAIN 572..717
FT /note="CID"
FT /evidence="ECO:0000259|PROSITE:PS51391"
FT REGION 27..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 157..176
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 385..570
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 778..894
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 418..456
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 473..490
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 491..505
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 515..533
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 778..809
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 813..827
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 829..894
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 894 AA; 100444 MW; 4C5CB5C0E4519356 CRC64;
MEKTEMQPSS LTSLTDDKLA RFVLGHQKKT KFQKEREDRE AKKRQADEEA ARIYATFVAS
FDNEDDTKGK AFVRGGTQAA QGHSQSAVQS RDVYRLKGKE QVASSSSGKK VSEMDKLLQE
IKQKDAEQRX MLQTIHRPKK RRAIDEFLEE MKERGPAPVS MEGVGMTKGS FDNGDPETTN
LYVGNLAPTV TEEVLQAEFG RYGEVYSVKI MWPRSEEERA RKRNCGFVSF YKRRDADDAR
INLDNKQLEG QPMIVGWGKA VKIQPQAHAP GLILPSVVPN PLVIATPAAS TANVDITGKQ
AVTIEIPIDQ EVRRRVNHLA HYVAADGLQF ENAVRMREAN NKXYSFLFDP QSALALYYRW
RVYSFAMGDD EHSWREKPFQ MTLEGPVWIP PKMPSRSPRD RRRGSHSRSS GRYSHHDRGA
SHRSHSRGRS YSRSRSRSSS RSPRRSRRRS RSGSRHRSRS SSSSSGDDRS SRRSRRRTRK
RRSRSRSRGR RSRSLSSDDS SSRKRSRHSR SRPRKDGRQH DENRHESSRE SRRPGGRGGF
SQGYGEKNEK LLTGQQIARA RDMERGRERN RLSNEDYDTF KELLDELTLE RESVKKTMGF
ALDNSEAAVD LVNIILESFK SSTSSGVALV GLXYVTSDIL HNSSAAVKNA SLFRTTFQEC
LPEIMDTLRI AHKSIAGRMS ANAMKEKVMN VLTAWESWSL FPPAVLVGLH ATFLRKVEED
EYIATHSLNF DGIGESDQER LRKTCRQSGI MATGDAKRLA VRLQWLKEFT SPTALIAPGS
TVNPSFQSNT TSNVRETATP TAPDIDTNDE TAETISEDGK GNGNVDDLDG EPIDGEPIVE
DSDDIDGELM DDGVLDGEPL DGDTAEDDLD GEPLDGEDLD GAPMDEEDLD GEPI
//
