ID A0A0X8GMA7_9BURK Unreviewed; 380 AA.
AC A0A0X8GMA7;
DT 13-APR-2016, integrated into UniProtKB/TrEMBL.
DT 13-APR-2016, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN ORFNames=VN23_02140 {ECO:0000313|EMBL:AMC33483.1};
OS Janthinobacterium sp. B9-8.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Janthinobacterium.
OX NCBI_TaxID=1236179 {ECO:0000313|EMBL:AMC33483.1, ECO:0000313|Proteomes:UP000069577};
RN [1] {ECO:0000313|EMBL:AMC33483.1, ECO:0000313|Proteomes:UP000069577}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B9-8 {ECO:0000313|EMBL:AMC33483.1,
RC ECO:0000313|Proteomes:UP000069577};
RA Xu X., Jin W., Wu Q., Jiang L., Huang H.;
RT "The whole genome sequence of Janthinbacterium sp. B9-8, a bacterium
RT isolated from low temperature sewage.";
RL Submitted (JAN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR EMBL; CP014222; AMC33483.1; -; Genomic_DNA.
DR RefSeq; WP_046353414.1; NZ_CP014222.1.
DR AlphaFoldDB; A0A0X8GMA7; -.
DR STRING; 1236179.VN23_02140; -.
DR KEGG; jab:VN23_02140; -.
DR OrthoDB; 9795622at2; -.
DR Proteomes; UP000069577; Chromosome.
DR GO; GO:0008081; F:phosphoric diester hydrolase activity; IEA:InterPro.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08602; GDPD_ScGlpQ1_like; 1.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 1.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR43620:SF7; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD6; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 1.
DR PROSITE; PS51704; GP_PDE; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..25
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 26..380
FT /note="glycerophosphodiester phosphodiesterase"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5007066485"
FT DOMAIN 46..373
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
SQ SEQUENCE 380 AA; 41086 MW; 86036F480F4F0280 CRC64;
MLPIKLTTLS TATLFAIALG LTACGGDDAD PLPVITQAVA TPLPAKLVIG HRGASALRPE
HTLAAYTKAI EAGADVIEPD LVSTKDGVLV ARHENEISGT TNVADKPEFA ARKKTKKIDN
VDYTGWFTED FTLAELKTLR AKERIPANRP ENTKYDGQFE IPTLQEVIDL AKAKTKETGR
TIGIYPETKH PSYFKSISLP LEKRLVDMLH ANGYKGKTAP VFIQSFEVAN LKEIRTLTDL
PIVQLLSAAG QPEDFRLAGD KRSYADIATA AGLKEVAKYA NGVGPSKDMI IPRDANNNLG
TPTSLVKDAH AANLVLHPYT FRPENPFLPA NLRKGDVKSL SERGDLAAEL TVFLQAGIDG
FFTDDPSIGR AALDAYLGKK
//