ID A0A101D508_9GAMM Unreviewed; 728 AA.
AC A0A101D508;
DT 13-APR-2016, integrated into UniProtKB/TrEMBL.
DT 13-APR-2016, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:KUJ88959.1};
GN ORFNames=XD36_0727 {ECO:0000313|EMBL:KUJ88959.1};
OS Halomonas sp. 54_146.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Halomonadaceae; Halomonas.
OX NCBI_TaxID=1635257 {ECO:0000313|EMBL:KUJ88959.1, ECO:0000313|Proteomes:UP000053192};
RN [1] {ECO:0000313|Proteomes:UP000053192}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=26787827; DOI=10.1128/mbio.01669-15;
RA Hu P., Tom L., Singh A., Thomas B.C., Baker B.J., Piceno Y.M.,
RA Andersen G.L., Banfield J.F.;
RT "Genome-Resolved Metagenomic Analysis Reveals Roles for Candidate Phyla and
RT Other Microbial Community Members in Biogeochemical Transformations in Oil
RT Reservoirs.";
RL MBio 7:e01669-15(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KUJ88959.1}.
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DR EMBL; LGEN01000005; KUJ88959.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A101D508; -.
DR STRING; 1635257.XD36_0727; -.
DR PATRIC; fig|1635257.4.peg.2707; -.
DR Proteomes; UP000053192; Unassembled WGS sequence.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 2.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 2.
DR NCBIfam; TIGR00229; sensory_box; 2.
DR PANTHER; PTHR44757:SF2; CYCLIC DI-GMP PHOSPHODIESTERASE PDER; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 2.
DR Pfam; PF13426; PAS_9; 2.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 2.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}.
FT DOMAIN 155..200
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 228..280
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 312..464
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 473..727
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
FT COILED 128..159
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 728 AA; 81876 MW; 3B2F2F07F369FBEE CRC64;
MDETCSGVKN DCPAALLATA VNGIIVTDKQ GTILRANQAA EAMFRYPSGT LVGHPITVLM
PMAVYFEYGS RDMVGATQEV EGIDRTGNRV PLLISVSTFN ESNEPRFAAF LQDFSERKHE
ERVLKDVNAE LEKRVRERTA QLEKEVERHQ QTIHHLELVN RIVERASHAV AITDADNRIL
YVNPAYEKMT GYKLKSVIGK KPSISKSGRH GPEFYRKMWA ALNKNLHWEG EIWDRRDDGA
VFPKLMSIDR LIDEEGKTRN FVATFHDLSE QKASEEEIER LQYYDSLTTL PNRSLFRHRL
QHEFEVSRRQ GTCVGVMLIN IDRFKQVNDT FGFLAGDQLL MEVAERLAIA VRRTDLVARQ
ESRRERDPDV VSRIGGDDFA VILNDLKKPE NATVVATRML NAMNEPFTIQ NKTETIEDIF
LQASIGIGIF PDNAANIDEL MRAAETAVVQ AKVHGGGEFR FFSDSMNHNS AERARLENDL
RRAVAEDAFT LYYQPKLDLM TNRFSSMEAL IRWPRDDGGM VSPGDFIPLA EETNLIVPLG
AWVLRRACRD TMALSERIGW VPGIAINLSA RQFRQPGLVD AVRVAIDESG IPPEKVELEI
TESMVMDDVE AAIETMRALR ELGVQLAIDD FGTGYSSLSY LKRFPVNTLK LDRAFIRDLP
LGAEDVAITE AVIALAKALK LNVVAEGVET REQLTFLSAR HCAYVQGFLL ARPGPLENMP
AVFSSNFV
//