ID A0A101VF77_9FIRM Unreviewed; 451 AA.
AC A0A101VF77;
DT 13-APR-2016, integrated into UniProtKB/TrEMBL.
DT 13-APR-2016, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=Transcriptional regulatory protein TyrR {ECO:0008006|Google:ProtNLM};
GN ORFNames=APF76_08740 {ECO:0000313|EMBL:KUO53440.1};
OS Desulfitibacter sp. BRH_c19.
OC Bacteria; Bacillota; Clostridia; Moorellales; Desulfitibacteraceae;
OC Desulfitibacter.
OX NCBI_TaxID=1734395 {ECO:0000313|EMBL:KUO53440.1, ECO:0000313|Proteomes:UP000053015};
RN [1] {ECO:0000313|EMBL:KUO53440.1, ECO:0000313|Proteomes:UP000053015}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BRH_c19 {ECO:0000313|EMBL:KUO53440.1};
RA Bagnoud A., Chourey K., Hettich R.L., De Bruijn I., Andersson A.F.,
RA Leupin O.X., Schwyn B., Bernier-Latmani R.;
RT "Microbial metabolic network in the subsurface.";
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KUO53440.1}.
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DR EMBL; LOER01000004; KUO53440.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A101VF77; -.
DR STRING; 1734395.APF76_08740; -.
DR Proteomes; UP000053015; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071:SF119; SIGMA-54 INTERACTING PROTEIN; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 2..55
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 146..375
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT COILED 112..146
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 451 AA; 51403 MW; 3F81337A2405B576 CRC64;
MNLEKLQEIL NNSYDEIFVV NSKGIVTYVN NASERNYGLK PSEIIGKTVY HLVEEGYYSP
SIAPVVFKEK KRVTLTQETM IGKKLVVTAT PILDGEGNID LVVMNTRDIT EIEKLKCNLE
DTEKLVQKYK QEVEELRKKE YKYEHLVVRS KSMKECVVLA QKVSSTDSTV LILGDSGTGK
NVMAKYIHHI SNRKNGPFKT INCAAIPDQL LESELFGYHR GAFTGANTAG KVGLLELSDG
GTLFLDEIAE IPLRLQAKLL EVIQENRFVP VGGTEYKNID IRIIAATNRD LEKMVRDGLF
REDLYYRINV IELEIPPLRD RLEDIVFLAH YFLNIYDKKY GMSHYFSQDS LDTLITHSWS
GNVRELQHVV ERLVITVKES KILPEHFPKS FSKSDKAKAN LALPNLVPLD VLEEELIIKA
YKQLGSSYKV AKALNISQSK ANRRIRRYLN K
//
