ID A0A109FCJ9_9BASI Unreviewed; 926 AA.
AC A0A109FCJ9;
DT 13-APR-2016, integrated into UniProtKB/TrEMBL.
DT 13-APR-2016, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=p-loop containing nucleoside triphosphate hydrolase protein {ECO:0000313|EMBL:KWU41992.1};
GN ORFNames=RHOSPDRAFT_21973 {ECO:0000313|EMBL:KWU41992.1};
OS Rhodotorula sp. JG-1b.
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina;
OC Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula.
OX NCBI_TaxID=1305733 {ECO:0000313|EMBL:KWU41992.1, ECO:0000313|Proteomes:UP000062823};
RN [1] {ECO:0000313|EMBL:KWU41992.1, ECO:0000313|Proteomes:UP000062823}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JG-1b {ECO:0000313|EMBL:KWU41992.1,
RC ECO:0000313|Proteomes:UP000062823};
RG DOE Joint Genome Institute;
RA Goordial J., Raymond-Bouchard I., Riley R., Ronholm J., Shapiro N.,
RA Woyke T., Grigoriev I.V., Labutti K.M., Greer C., Whyte L., Bakermans C.;
RT "Draft genome of eurypsychrophile Rhodotorula sp. JG1b isolated from
RT permafrost in the hyper-arid Upper Elevation McMurdo Dry Valleys,
RT Antarctica.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KQ954519; KWU41992.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A109FCJ9; -.
DR STRING; 1305733.A0A109FCJ9; -.
DR OrthoDB; 166721at2759; -.
DR Proteomes; UP000062823; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd04098; eEF2_C_snRNP; 1.
DR CDD; cd04090; EF2_II_snRNP; 1.
DR CDD; cd01683; EF2_IV_snRNP; 1.
DR CDD; cd16264; snRNP_III; 1.
DR CDD; cd04167; Snu114p; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.30.70.240; -; 1.
DR Gene3D; 3.30.70.870; Elongation Factor G (Translational Gtpase), domain 3; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 3.90.1430.10; Yeast translation eEF2 (G' domain); 1.
DR InterPro; IPR035647; EFG_III/V.
DR InterPro; IPR000640; EFG_V-like.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR031950; EFTUD2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR044121; Snu114_GTP-bd.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR005517; Transl_elong_EFG/EF2_IV.
DR InterPro; IPR035655; U5-116kDa_C.
DR NCBIfam; TIGR00231; small_GTP; 1.
DR PANTHER; PTHR42908:SF6; 116 KDA U5 SMALL NUCLEAR RIBONUCLEOPROTEIN COMPONENT; 1.
DR PANTHER; PTHR42908; TRANSLATION ELONGATION FACTOR-RELATED; 1.
DR Pfam; PF00679; EFG_C; 1.
DR Pfam; PF03764; EFG_IV; 1.
DR Pfam; PF16004; EFTUD2; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SMART; SM00838; EFG_C; 1.
DR SMART; SM00889; EFG_IV; 1.
DR SUPFAM; SSF54980; EF-G C-terminal domain-like; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Hydrolase {ECO:0000313|EMBL:KWU41992.1};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000062823}.
FT DOMAIN 81..289
FT /note="Tr-type G"
FT /evidence="ECO:0000259|PROSITE:PS51722"
SQ SEQUENCE 926 AA; 102852 MW; 5414D1241D568372 CRC64;
MPADIPSSNA IVLHDDKTYY PSASATYGPG VETMVQEEDA QPLSVPIVEP VKTRKFRLGT
TQGPERRWDD QFLMGLASNP ETVRNVAIVG HLHHGKTALV DMLVYETHVI DVDVDKQLRY
TDTHTLSQAR KISLKSSPMS LVLPNTKGKS YLVNLVDTPG HANFVDEIAS AVRVADGAVV
VVDCVEGVLL TATQTIQHLV KQKVPIVLVL NKLDRLILEL RLPPGDAYFK LRQTIEEVNT
VISEIDPDPA LRVSPERGNV AFASTQMGWC FTLKSFAKMY ADTFGPINLD QFAARLWGNI
YYHSETRKFS RQAAPGAKRG FEHFILDPLY KLYSQVIGED TDTLKKTLHQ LGIHFKPSVF
KMDARPLLRL VLSHFFGPAT GFVDMLVEHV PNPQEGARIK VEQTFTGALD SPLGQAMDAC
DPAGPLAIQI VKLYPTPDAG EFRAFGRVLS GTAQVGMDVK VLGEGYSPED EEDMVVQQIG
AIYIGEARYD IETDAMPAGN FVQLSGVDNS ISKTATLIAA DYDASELRTF RPIQHLTQSV
LKVSVEPLQP SELPKMLDGL RKVNKTYPLL ETRVEESGEH VLIGTGELYL DCVLHDLRVM
FAEIEIKVSD PVVRFCETVV ETSALKCYAD TPNKKNKITM IAEPLERGIA EDIESGRISI
RLPPKQLGAH FQTKYGWDLL ASRSIWAFGP DDQGPNLLMD DTLPSDVDKK LLYSVKESIK
QGFQWGCREG PLCDEPIRNV KFRLLGADLA QEPIYRGGGQ IIPTARRVCY SSFLMATPRL
QEPVYFVEIQ TPQDCIPAIY EILARRRGHV TKDIPKPGSP LFTVQAYIPV VDANGFETDL
RTHTLGQAFC MQTFDHFSNC PGDPLDKTIQ LRPLEPAPAQ ALARDFVLKM RRRKGLNDQI
NVAKFLESVS LSVSRGLLSA WLMCEP
//
