GenomeNet

Database: UniProt
Entry: A0A109JPV8_9BRAD
LinkDB: A0A109JPV8_9BRAD
Original site: A0A109JPV8_9BRAD 
ID   A0A109JPV8_9BRAD        Unreviewed;       344 AA.
AC   A0A109JPV8;
DT   13-APR-2016, integrated into UniProtKB/TrEMBL.
DT   13-APR-2016, sequence version 1.
DT   27-MAR-2024, entry version 29.
DE   SubName: Full=D-alanine--D-alanine ligase {ECO:0000313|EMBL:KWV52923.1};
GN   ORFNames=AS156_09830 {ECO:0000313|EMBL:KWV52923.1};
OS   Bradyrhizobium macuxiense.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC   Nitrobacteraceae; Bradyrhizobium.
OX   NCBI_TaxID=1755647 {ECO:0000313|EMBL:KWV52923.1, ECO:0000313|Proteomes:UP000057737};
RN   [1] {ECO:0000313|EMBL:KWV52923.1, ECO:0000313|Proteomes:UP000057737}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BR 10303 {ECO:0000313|EMBL:KWV52923.1,
RC   ECO:0000313|Proteomes:UP000057737};
RA   Zelli J.E., Simoes-Araujo J.L., Barauna A.C., Silva K.;
RT   "Draft Genome Sequence of the Strain BR 10303 (Bradyrhizobium sp.) isolated
RT   from nodules of Centrolobium paraense.";
RL   Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the D-alanine--D-alanine ligase family.
CC       {ECO:0000256|ARBA:ARBA00010871}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KWV52923.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; LNCU01000081; KWV52923.1; -; Genomic_DNA.
DR   RefSeq; WP_066509341.1; NZ_LNCU01000081.1.
DR   AlphaFoldDB; A0A109JPV8; -.
DR   Proteomes; UP000057737; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0008716; F:D-alanine-D-alanine ligase activity; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR   GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR   Gene3D; 3.30.1490.20; ATP-grasp fold, A domain; 1.
DR   Gene3D; 3.30.470.20; ATP-grasp fold, B domain; 1.
DR   InterPro; IPR011761; ATP-grasp.
DR   InterPro; IPR013815; ATP_grasp_subdomain_1.
DR   InterPro; IPR011095; Dala_Dala_lig_C.
DR   InterPro; IPR016185; PreATP-grasp_dom_sf.
DR   PANTHER; PTHR23132; D-ALANINE--D-ALANINE LIGASE; 1.
DR   PANTHER; PTHR23132:SF0; D-ALANINE-D-ALANINE LIGASE FAMILY; 1.
DR   Pfam; PF07478; Dala_Dala_lig_C; 1.
DR   SUPFAM; SSF56059; Glutathione synthetase ATP-binding domain-like; 1.
DR   SUPFAM; SSF52440; PreATP-grasp domain; 1.
DR   PROSITE; PS50975; ATP_GRASP; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|PROSITE-ProRule:PRU00409};
KW   Cell wall biogenesis/degradation {ECO:0000256|ARBA:ARBA00023316};
KW   Ligase {ECO:0000313|EMBL:KWV52923.1};
KW   Nucleotide-binding {ECO:0000256|PROSITE-ProRule:PRU00409}.
FT   DOMAIN          118..331
FT                   /note="ATP-grasp"
FT                   /evidence="ECO:0000259|PROSITE:PS50975"
SQ   SEQUENCE   344 AA;  38427 MW;  D6EBE87673F296F9 CRC64;
     MRRLRILVLM HPDCVPPDST DGYTAQQINA WKTEFDVVST LRTAGHDVRP LGVQEEIKPV
     RDEIEGFKPH VVFTLLEEFH YEVVYDHHIA SYLELMKIPY TGCNPRGLIL ARGKDLSKTL
     VHHRRIAVPA FAVFPMHRKV KRPPRLALPL IVKSLNQDGS LGISQASIVD TDEKLAERVA
     FIHERVGTAA IAEQYIEGRE LYVGVLGNNR LRVLPVWELK FGSMGGHGAR QIATEKVKHD
     PSYQERVGIV DGPAKDLAPE VSARIQHMAK RIYRTLGLDG YARIDFRLAA DGIPYFIEAN
     PNPEIAKSQE FATAAQHDGL DYPDLLNRIV TLGISRAKAG VSLG
//
DBGET integrated database retrieval system