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Database: UniProt
Entry: A0A137PEP9_CONC2
LinkDB: A0A137PEP9_CONC2
Original site: A0A137PEP9_CONC2 
ID   A0A137PEP9_CONC2        Unreviewed;       663 AA.
AC   A0A137PEP9;
DT   11-MAY-2016, integrated into UniProtKB/TrEMBL.
DT   11-MAY-2016, sequence version 1.
DT   24-JAN-2024, entry version 23.
DE   SubName: Full=Rad4-domain-containing protein {ECO:0000313|EMBL:KXN73479.1};
GN   ORFNames=CONCODRAFT_3580 {ECO:0000313|EMBL:KXN73479.1};
OS   Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638)
OS   (Delacroixia coronata).
OC   Eukaryota; Fungi; Fungi incertae sedis; Zoopagomycota;
OC   Entomophthoromycotina; Entomophthoromycetes; Entomophthorales;
OC   Ancylistaceae; Conidiobolus.
OX   NCBI_TaxID=796925 {ECO:0000313|EMBL:KXN73479.1, ECO:0000313|Proteomes:UP000070444};
RN   [1] {ECO:0000313|EMBL:KXN73479.1, ECO:0000313|Proteomes:UP000070444}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NRRL 28638 {ECO:0000313|EMBL:KXN73479.1,
RC   ECO:0000313|Proteomes:UP000070444};
RX   PubMed=25977457; DOI=10.1093/gbe/evv090;
RA   Chang Y., Wang S., Sekimoto S., Aerts A.L., Choi C., Clum A., LaButti K.M.,
RA   Lindquist E.A., Yee Ngan C., Ohm R.A., Salamov A.A., Grigoriev I.V.,
RA   Spatafora J.W., Berbee M.L.;
RT   "Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell
RT   Walls of Algal Ancestors of Land Plants.";
RL   Genome Biol. Evol. 7:1590-1601(2015).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the XPC family. {ECO:0000256|ARBA:ARBA00009525}.
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DR   EMBL; KQ964436; KXN73479.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A137PEP9; -.
DR   STRING; 796925.A0A137PEP9; -.
DR   EnsemblFungi; KXN73479; KXN73479; CONCODRAFT_3580.
DR   OrthoDB; 181129at2759; -.
DR   Proteomes; UP000070444; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR   GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR   Gene3D; 2.20.20.110; Rad4, beta-hairpin domain BHD1; 1.
DR   Gene3D; 3.30.70.2460; Rad4, beta-hairpin domain BHD3; 1.
DR   Gene3D; 3.90.260.10; Transglutaminase-like; 1.
DR   InterPro; IPR018327; BHD_2.
DR   InterPro; IPR004583; DNA_repair_Rad4.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   InterPro; IPR018325; Rad4/PNGase_transGLS-fold.
DR   InterPro; IPR018326; Rad4_beta-hairpin_dom1.
DR   InterPro; IPR018328; Rad4_beta-hairpin_dom3.
DR   InterPro; IPR042488; Rad4_BHD3_sf.
DR   InterPro; IPR036985; Transglutaminase-like_sf.
DR   PANTHER; PTHR12135:SF0; DNA REPAIR PROTEIN COMPLEMENTING XP-C CELLS; 1.
DR   PANTHER; PTHR12135; DNA REPAIR PROTEIN XP-C / RAD4; 1.
DR   Pfam; PF10403; BHD_1; 1.
DR   Pfam; PF10405; BHD_3; 1.
DR   Pfam; PF03835; Rad4; 1.
DR   SMART; SM01030; BHD_1; 1.
DR   SMART; SM01031; BHD_2; 1.
DR   SMART; SM01032; BHD_3; 1.
DR   SUPFAM; SSF54001; Cysteine proteinases; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000070444}.
FT   DOMAIN          450..501
FT                   /note="Rad4 beta-hairpin"
FT                   /evidence="ECO:0000259|SMART:SM01030"
FT   DOMAIN          503..539
FT                   /note="Rad4 beta-hairpin"
FT                   /evidence="ECO:0000259|SMART:SM01031"
FT   DOMAIN          546..620
FT                   /note="Rad4 beta-hairpin"
FT                   /evidence="ECO:0000259|SMART:SM01032"
FT   REGION          1..41
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          56..78
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          610..637
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        1..29
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   663 AA;  76709 MW;  CCC8EDD631716C4C CRC64;
     MECSSQEYES NSSNKRLKLD SSQNKNSSEY EVNGEEEEDN FELVFEEEDD YYMEDESLCL
     PDPGSDLPSP APLDESSPEA IQNFDINKYI YNPSSSQEPS QSQIKIENAP DVDFSGEEED
     FNDIIWDEVV DESVNDNLVK NEIEQNIVET SLNSRIYDTQ LPGLNTESIT ITMDEPKEEK
     KNRIGLSKVE RDLIINLHRS SFLGWVAVGK YWNCLIKNKA LQAQLMSLLP LNFFKYAQLR
     QGQSLLPNLT QLLKWWKMKF NFKKHNCIFC NNKKCTIYEL DEPILEGCSN LMSIQFVSLL
     KALGFRVRLI LGVQLITSYV YFMSLADTPG QYNELSYNAI WIEVLDPFTD MWTVIQPSSA
     FAAPGSARPD RLSQLIPKHP HPSKVMTYVF AFDQSVSEIT PRYVPNFLSV ATLARSRLLS
     NQFLSEIFED MEPTTTWQFK ERQQMEQYQV MEKMPQSLAG FRNHPLYTLP QLLHKNQFIL
     PSTRPIGLFK GSPVYDTNSV LNLKSEMNWY LLGRVIKEGE SALKFNLFAE YQTKLYEPPT
     IEDGKLPRNK HGNWDLYQPH MLPQNTVHIN LPNVLTFLKT SDYEYVEAVT GFIFNKQGAI
     PQVNGAIVHS VDAEEIKEYC EAELERKERE EKFKEKKEAY LLWIDIIKFV KSRARIMKEF
     GVE
//
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