ID A0A139B7H5_9BIFI Unreviewed; 251 AA.
AC A0A139B7H5;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=Probable transcriptional regulatory protein BPS1E_1683 {ECO:0000256|HAMAP-Rule:MF_00693};
GN ORFNames=BPS1E_1683 {ECO:0000313|EMBL:PAC72799.1}, DW102_00485
GN {ECO:0000313|EMBL:RHJ82029.1}, DXA22_07890
GN {ECO:0000313|EMBL:RGY75868.1}, DXA79_04595
GN {ECO:0000313|EMBL:RGP03746.1};
OS Bifidobacterium pseudocatenulatum.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Bifidobacterium.
OX NCBI_TaxID=28026 {ECO:0000313|EMBL:PAC72799.1, ECO:0000313|Proteomes:UP000216789};
RN [1] {ECO:0000313|EMBL:PAC72799.1, ECO:0000313|Proteomes:UP000216789}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1E {ECO:0000313|EMBL:PAC72799.1,
RC ECO:0000313|Proteomes:UP000216789};
RX PubMed=28837128; DOI=10.1038/ismej.2017.138;
RA Milani C., Mangifesta M., Mancabelli L., Lugli G.A., James K., Duranti S.,
RA Turroni F., Ferrario C., Ossiprandi M.C., van Sinderen D., Ventura M.;
RT "Unveiling bifidobacterial biogeography across the mammalian branch of the
RT tree of life.";
RL ISME J. 11:2834-2847(2017).
RN [2] {ECO:0000313|Proteomes:UP000261031, ECO:0000313|Proteomes:UP000284163}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AM08-25 {ECO:0000313|EMBL:RHJ82029.1,
RC ECO:0000313|Proteomes:UP000286301}, CF01-1
RC {ECO:0000313|EMBL:RGY75868.1, ECO:0000313|Proteomes:UP000284163}, and
RC OF05-12 {ECO:0000313|EMBL:RGP03746.1,
RC ECO:0000313|Proteomes:UP000261031};
RA Zou Y., Xue W., Luo G.;
RT "A genome reference for cultivated species of the human gut microbiota.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00693}.
CC -!- SIMILARITY: Belongs to the TACO1 family.
CC {ECO:0000256|ARBA:ARBA00008724, ECO:0000256|HAMAP-Rule:MF_00693}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PAC72799.1}.
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DR EMBL; MNLB01000011; PAC72799.1; -; Genomic_DNA.
DR EMBL; QSWD01000002; RGP03746.1; -; Genomic_DNA.
DR EMBL; QSDK01000012; RGY75868.1; -; Genomic_DNA.
DR EMBL; QRMQ01000001; RHJ82029.1; -; Genomic_DNA.
DR RefSeq; WP_004222191.1; NZ_SPFZ01000001.1.
DR STRING; 28026.GCA_000940535_01040; -.
DR GeneID; 69563942; -.
DR OrthoDB; 9781053at2; -.
DR Proteomes; UP000216789; Unassembled WGS sequence.
DR Proteomes; UP000261031; Unassembled WGS sequence.
DR Proteomes; UP000284163; Unassembled WGS sequence.
DR Proteomes; UP000286301; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.10.200; -; 1.
DR Gene3D; 3.30.70.980; -; 2.
DR HAMAP; MF_00693; Transcrip_reg_TACO1; 1.
DR InterPro; IPR017856; Integrase-like_N.
DR InterPro; IPR048300; TACO1_YebC-like_2nd/3rd_dom.
DR InterPro; IPR049083; TACO1_YebC_N.
DR InterPro; IPR002876; Transcrip_reg_TACO1-like.
DR InterPro; IPR026564; Transcrip_reg_TACO1-like_dom3.
DR InterPro; IPR029072; YebC-like.
DR NCBIfam; TIGR01033; YebC/PmpR family DNA-binding transcriptional regulator; 1.
DR PANTHER; PTHR12532:SF6; TRANSCRIPTIONAL REGULATORY PROTEIN YEBC-RELATED; 1.
DR PANTHER; PTHR12532; UNCHARACTERIZED; 1.
DR Pfam; PF20772; TACO1_YebC_N; 1.
DR Pfam; PF01709; Transcrip_reg; 1.
DR SUPFAM; SSF75625; YebC-like; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_00693};
KW DNA-binding {ECO:0000256|HAMAP-Rule:MF_00693, ECO:0000313|EMBL:RGP03746.1};
KW Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW Rule:MF_00693};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015, ECO:0000256|HAMAP-
KW Rule:MF_00693}.
FT DOMAIN 5..76
FT /note="TACO1/YebC-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF20772"
FT DOMAIN 83..238
FT /note="TACO1/YebC-like second and third"
FT /evidence="ECO:0000259|Pfam:PF01709"
SQ SEQUENCE 251 AA; 27035 MW; 66BE03B9D3428CE8 CRC64;
MSGHSKWATT KHKKAAIDAK RGKLFAKLIK NIEIAARMGG GDPDGNPSLY DAIYKAKKAS
MPADNIKRAV KRGSGEEAGG ANYEDIVYEG YAPAGVGLII ECLTDNRNRA AAEVRSTLTK
GNGSLATSGS VSFNFERKGQ IIVPAEGVDF DDLFEKAAEA GAEDVTDDGD VFTVVTGPSE
MIDVRKALQD AGFDYDSADL VMMPKNEVEL TLEDAQKVSK LIDNLDDLDD VQNIYSNWTA
SDEVMAQLDE E
//
