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Database: UniProt
Entry: A0A143QDX1_9NOCA
LinkDB: A0A143QDX1_9NOCA
Original site: A0A143QDX1_9NOCA 
ID   A0A143QDX1_9NOCA        Unreviewed;       488 AA.
AC   A0A143QDX1;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   24-JAN-2024, entry version 29.
DE   RecName: Full=glutamate synthase (NADPH) {ECO:0000256|ARBA:ARBA00012079};
DE            EC=1.4.1.13 {ECO:0000256|ARBA:ARBA00012079};
GN   Name=gltD {ECO:0000313|EMBL:AMY21081.1};
GN   ORFNames=A3Q40_03730 {ECO:0000313|EMBL:AMY21081.1};
OS   Rhodococcus sp. PBTS 1.
OC   Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae;
OC   Rhodococcus.
OX   NCBI_TaxID=1653478 {ECO:0000313|EMBL:AMY21081.1, ECO:0000313|Proteomes:UP000076180};
RN   [1] {ECO:0000313|EMBL:AMY21081.1, ECO:0000313|Proteomes:UP000076180}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PBTS 1 {ECO:0000313|EMBL:AMY21081.1,
RC   ECO:0000313|Proteomes:UP000076180};
RX   PubMed=27284129;
RA   Stamler R.A., Vereecke D., Zhang Y., Schilkey F., Devitt N., Randall J.J.;
RT   "Complete Genome and Plasmid Sequences for Rhodococcus fascians D188 and
RT   Draft Sequences for Rhodococcus Isolates PBTS 1 and PBTS 2.";
RL   Genome Announc. 4:0-0(2016).
RN   [2] {ECO:0000313|Proteomes:UP000076180}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PBTS 1 {ECO:0000313|Proteomes:UP000076180};
RA   Stamer R., Vereecke D., Zhang Y., Schilkey F., Devitt N., Randall J.;
RT   "Complete Genome and Plasmid Sequences for Rhodococcus fascians D188 and
RT   Draft Sequences for Rhodococcus spp. Isolates PBTS 1 and PBTS 2.";
RL   Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=2 L-glutamate + NADP(+) = 2-oxoglutarate + H(+) + L-glutamine
CC         + NADPH; Xref=Rhea:RHEA:15501, ChEBI:CHEBI:15378, ChEBI:CHEBI:16810,
CC         ChEBI:CHEBI:29985, ChEBI:CHEBI:57783, ChEBI:CHEBI:58349,
CC         ChEBI:CHEBI:58359; EC=1.4.1.13;
CC         Evidence={ECO:0000256|ARBA:ARBA00001895};
CC   -!- PATHWAY: Amino-acid biosynthesis; L-glutamate biosynthesis via GLT
CC       pathway; L-glutamate from 2-oxoglutarate and L-glutamine (NADP(+)
CC       route): step 1/1. {ECO:0000256|ARBA:ARBA00037898}.
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DR   EMBL; CP015219; AMY21081.1; -; Genomic_DNA.
DR   RefSeq; WP_068104372.1; NZ_CP015219.1.
DR   AlphaFoldDB; A0A143QDX1; -.
DR   STRING; 1653478.A3Q40_03730; -.
DR   KEGG; rhu:A3Q40_03730; -.
DR   PATRIC; fig|1653478.3.peg.3787; -.
DR   Proteomes; UP000076180; Chromosome.
DR   GO; GO:0004355; F:glutamate synthase (NADPH) activity; IEA:UniProtKB-EC.
DR   GO; GO:0051536; F:iron-sulfur cluster binding; IEA:InterPro.
DR   GO; GO:0006537; P:glutamate biosynthetic process; IEA:UniProtKB-KW.
DR   Gene3D; 1.10.1060.10; Alpha-helical ferredoxin; 1.
DR   Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 2.
DR   InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR   InterPro; IPR028261; DPD_II.
DR   InterPro; IPR036188; FAD/NAD-bd_sf.
DR   InterPro; IPR023753; FAD/NAD-binding_dom.
DR   InterPro; IPR006005; Glut_synth_ssu1.
DR   InterPro; IPR009051; Helical_ferredxn.
DR   NCBIfam; TIGR01317; GOGAT_sm_gam; 1.
DR   PANTHER; PTHR43100; GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN; 1.
DR   PANTHER; PTHR43100:SF1; GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN; 1.
DR   Pfam; PF14691; Fer4_20; 1.
DR   Pfam; PF07992; Pyr_redox_2; 1.
DR   PRINTS; PR00419; ADXRDTASE.
DR   SUPFAM; SSF46548; alpha-helical ferredoxin; 1.
DR   SUPFAM; SSF51971; Nucleotide-binding domain; 2.
DR   PROSITE; PS51379; 4FE4S_FER_2; 1.
PE   4: Predicted;
KW   Amino-acid biosynthesis {ECO:0000256|ARBA:ARBA00022605};
KW   Glutamate biosynthesis {ECO:0000256|ARBA:ARBA00023164};
KW   Oxidoreductase {ECO:0000256|ARBA:ARBA00023002,
KW   ECO:0000313|EMBL:AMY21081.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000076180}.
FT   DOMAIN          38..69
FT                   /note="4Fe-4S ferredoxin-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51379"
SQ   SEQUENCE   488 AA;  53356 MW;  B7A26A89D25568AF CRC64;
     MGDPQGFLKN TSRELPKRRP VDLRLMDWKE VYEDFSTDTL RTQASRCMDC GIPFCHNGCP
     LGNLIPEWND LVYKDRWRES IDRLHATNNF PEFTGRLCPA PCEASCVLGI NQDPVTIKQV
     EVEIIDRAFD EGWVQPVYPT YLTGKTVAVV GSGPAGLAAA QQLTRAGHTV TVFERADRIG
     GLLRYGIPEF KMEKRHIDRR IAQMEAEGTI FRTGVNVGVD ITAADLRAQF DAVVLSGGAT
     KARDLEVPGR EYGGIHQAME FLPWANRVQL GDAVTDANGQ PPITARGKKV VIIGGGDTGA
     DCLGTSHRQG AASVHQFEIM PRPPEERADS TPWPTYPLVY RVSSAHEEGG ERVFSVNTEK
     FTGENGIVTG LDAHEVEFKD GRFHKVEGSD FHLEADLVLL AMGFTGPEKP GLLTDLGVNL
     NERGNVARTD KWNTNVEGVF VAGDMGRGQS LIVWAIAEGR SAASAVDSFL MGKTALPAPI
     TPTQMAQR
//
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