ID A0A151M7J7_ALLMI Unreviewed; 1027 AA.
AC A0A151M7J7;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 {ECO:0008006|Google:ProtNLM};
GN ORFNames=Y1Q_0004220 {ECO:0000313|EMBL:KYO20486.1};
OS Alligator mississippiensis (American alligator).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC Alligator.
OX NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO20486.1};
RN [1] {ECO:0000313|EMBL:KYO20486.1, ECO:0000313|Proteomes:UP000050525}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO20486.1};
RX PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA Ray D.A.;
RT "Sequencing three crocodilian genomes to illuminate the evolution of
RT archosaurs and amniotes.";
RL Genome Biol. 13:415-415(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. ISWI subfamily.
CC {ECO:0000256|ARBA:ARBA00009687}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KYO20486.1}.
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DR EMBL; AKHW03006387; KYO20486.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151M7J7; -.
DR STRING; 8496.A0A151M7J7; -.
DR eggNOG; KOG0385; Eukaryota.
DR Proteomes; UP000050525; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0031491; F:nucleosome binding; IEA:InterPro.
DR CDD; cd18064; DEXHc_SMARCA5; 1.
DR CDD; cd00167; SANT; 2.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 1.20.5.1190; iswi atpase; 1.
DR Gene3D; 1.10.1040.30; ISWI, HAND domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR015194; ISWI_HAND-dom.
DR InterPro; IPR036306; ISWI_HAND-dom_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR017884; SANT_dom.
DR InterPro; IPR015195; SLIDE.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45623; CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED; 1.
DR PANTHER; PTHR45623:SF49; ISW-1; 1.
DR Pfam; PF09110; HAND; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF09111; SLIDE; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00717; SANT; 2.
DR SUPFAM; SSF101224; HAND domain of the nucleosome remodeling ATPase ISWI; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51293; SANT; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000050525}.
FT DOMAIN 135..300
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 430..581
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 783..835
FT /note="SANT"
FT /evidence="ECO:0000259|PROSITE:PS51293"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 55..74
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 959..991
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1027 AA; 120529 MW; AA76AD405967CCE7 CRC64;
MEETFDDASP GKQKEIQELD PTYEEKMQTD RANRFEYLLK QTELFAHFIQ PAAQKTPTSP
LKMKPGRPRI KKDEKQNLLS VGDYRHRRTE QEEDEELLTE SSKATNVCTR FEESPSYVKW
GKLRDYQVRG LNWLISLYEN GINGILADEM GLGKTLQTIS LLGYMKHYRN IPGPHMVLVP
KSTLHNWMSE FKRWVPTLRA VCLIGDKDQR AAFVRDVLLP GEWDVCVTSY EMLIKEKSVF
KKFNWRYLVI DEAHRIKNEK SKLSEIVREF KTTNRLLLTG TPLQNNLHEL WALLNFLLPD
VFNSSEDFDS WFDTNNCLGD QKLVERLHMV LRPFLLRRIK ADVEKSLPPK KEVKIYVGLS
KMQREWYTRI LMKDIDILNS AGKLDKMRLL NILMQLRKCC NHPYLFDGAE PGPPYTTDMH
LVTNSGKMVV LDKLLPKLKE QGSRVLIFSQ MTRVLDILED YCMWRNYEYC RLDGQTPHDE
RQASINAYNE PGSSKFVFML STRAGGLGIN LATADVVILY DSDWNPQVDL QAMDRAHRIG
QTKTVRVFRF ITDNTVEERI VERAEMKLRL DSIVIQQGRL VDQNLNKLGK DEMLQMIRHG
ATHVFASKES EITDEDIDHI LERGAKKTAE MNEKLSNMGE SSLRNFTMDT ESSVYNFEGE
DYREKQKMAF TEWIEPPKRE RKANYAVDAY FREALRVSEP KAPKAPRPPK QPNVQDFQFF
PPRLFELLEK EILYYRKTIG YKVPRNPDLP NAAQAQKEEQ LKIDEAEPLN DEELEEKEKL
LTQGFTNWNK RDFNQFIKAN EKWGRDDIEN IAREVEGKTP EEVIEYSAVF WERCNELQDI
EKIMAQIERG EARIQRRISI KKALDTKIGR YKAPFHQLRI SYGTNKGKNY TEEEDRFLIC
MLHKLGFDKE NVYDELRQCI RNSPQFRFDW FLKSRTAMEL QRRCNTLITL IERENMELEE
KEKAEKKKRG PKPSSAQKRK MDGTPDGRGR KKKLKLLLDL LPTYRPSFNC YYFMDQSMSD
SSKPEDF
//