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Database: UniProt
Entry: A0A151M7J7_ALLMI
LinkDB: A0A151M7J7_ALLMI
Original site: A0A151M7J7_ALLMI 
ID   A0A151M7J7_ALLMI        Unreviewed;      1027 AA.
AC   A0A151M7J7;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   24-JAN-2024, entry version 35.
DE   RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 {ECO:0008006|Google:ProtNLM};
GN   ORFNames=Y1Q_0004220 {ECO:0000313|EMBL:KYO20486.1};
OS   Alligator mississippiensis (American alligator).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC   Alligator.
OX   NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO20486.1};
RN   [1] {ECO:0000313|EMBL:KYO20486.1, ECO:0000313|Proteomes:UP000050525}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO20486.1};
RX   PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA   St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA   Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA   Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA   Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA   Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA   McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA   Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA   Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA   Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA   Ray D.A.;
RT   "Sequencing three crocodilian genomes to illuminate the evolution of
RT   archosaurs and amniotes.";
RL   Genome Biol. 13:415-415(2012).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. ISWI subfamily.
CC       {ECO:0000256|ARBA:ARBA00009687}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KYO20486.1}.
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DR   EMBL; AKHW03006387; KYO20486.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A151M7J7; -.
DR   STRING; 8496.A0A151M7J7; -.
DR   eggNOG; KOG0385; Eukaryota.
DR   Proteomes; UP000050525; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0031491; F:nucleosome binding; IEA:InterPro.
DR   CDD; cd18064; DEXHc_SMARCA5; 1.
DR   CDD; cd00167; SANT; 2.
DR   CDD; cd18793; SF2_C_SNF; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR   Gene3D; 1.20.5.1190; iswi atpase; 1.
DR   Gene3D; 1.10.1040.30; ISWI, HAND domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR015194; ISWI_HAND-dom.
DR   InterPro; IPR036306; ISWI_HAND-dom_sf.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR001005; SANT/Myb.
DR   InterPro; IPR017884; SANT_dom.
DR   InterPro; IPR015195; SLIDE.
DR   InterPro; IPR038718; SNF2-like_sf.
DR   InterPro; IPR000330; SNF2_N.
DR   PANTHER; PTHR45623; CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED; 1.
DR   PANTHER; PTHR45623:SF49; ISW-1; 1.
DR   Pfam; PF09110; HAND; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF09111; SLIDE; 1.
DR   Pfam; PF00176; SNF2-rel_dom; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00717; SANT; 2.
DR   SUPFAM; SSF101224; HAND domain of the nucleosome remodeling ATPase ISWI; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 2.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS51293; SANT; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000050525}.
FT   DOMAIN          135..300
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          430..581
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   DOMAIN          783..835
FT                   /note="SANT"
FT                   /evidence="ECO:0000259|PROSITE:PS51293"
FT   REGION          1..26
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          55..74
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          959..991
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1027 AA;  120529 MW;  AA76AD405967CCE7 CRC64;
     MEETFDDASP GKQKEIQELD PTYEEKMQTD RANRFEYLLK QTELFAHFIQ PAAQKTPTSP
     LKMKPGRPRI KKDEKQNLLS VGDYRHRRTE QEEDEELLTE SSKATNVCTR FEESPSYVKW
     GKLRDYQVRG LNWLISLYEN GINGILADEM GLGKTLQTIS LLGYMKHYRN IPGPHMVLVP
     KSTLHNWMSE FKRWVPTLRA VCLIGDKDQR AAFVRDVLLP GEWDVCVTSY EMLIKEKSVF
     KKFNWRYLVI DEAHRIKNEK SKLSEIVREF KTTNRLLLTG TPLQNNLHEL WALLNFLLPD
     VFNSSEDFDS WFDTNNCLGD QKLVERLHMV LRPFLLRRIK ADVEKSLPPK KEVKIYVGLS
     KMQREWYTRI LMKDIDILNS AGKLDKMRLL NILMQLRKCC NHPYLFDGAE PGPPYTTDMH
     LVTNSGKMVV LDKLLPKLKE QGSRVLIFSQ MTRVLDILED YCMWRNYEYC RLDGQTPHDE
     RQASINAYNE PGSSKFVFML STRAGGLGIN LATADVVILY DSDWNPQVDL QAMDRAHRIG
     QTKTVRVFRF ITDNTVEERI VERAEMKLRL DSIVIQQGRL VDQNLNKLGK DEMLQMIRHG
     ATHVFASKES EITDEDIDHI LERGAKKTAE MNEKLSNMGE SSLRNFTMDT ESSVYNFEGE
     DYREKQKMAF TEWIEPPKRE RKANYAVDAY FREALRVSEP KAPKAPRPPK QPNVQDFQFF
     PPRLFELLEK EILYYRKTIG YKVPRNPDLP NAAQAQKEEQ LKIDEAEPLN DEELEEKEKL
     LTQGFTNWNK RDFNQFIKAN EKWGRDDIEN IAREVEGKTP EEVIEYSAVF WERCNELQDI
     EKIMAQIERG EARIQRRISI KKALDTKIGR YKAPFHQLRI SYGTNKGKNY TEEEDRFLIC
     MLHKLGFDKE NVYDELRQCI RNSPQFRFDW FLKSRTAMEL QRRCNTLITL IERENMELEE
     KEKAEKKKRG PKPSSAQKRK MDGTPDGRGR KKKLKLLLDL LPTYRPSFNC YYFMDQSMSD
     SSKPEDF
//
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