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Database: UniProt
Entry: A0A151MRU3_ALLMI
LinkDB: A0A151MRU3_ALLMI
Original site: A0A151MRU3_ALLMI 
ID   A0A151MRU3_ALLMI        Unreviewed;       508 AA.
AC   A0A151MRU3;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   24-JAN-2024, entry version 20.
DE   SubName: Full=Nectin-4 {ECO:0000313|EMBL:KYO27150.1};
GN   Name=PVRL4 {ECO:0000313|EMBL:KYO27150.1};
GN   ORFNames=Y1Q_0012368 {ECO:0000313|EMBL:KYO27150.1};
OS   Alligator mississippiensis (American alligator).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC   Alligator.
OX   NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO27150.1};
RN   [1] {ECO:0000313|EMBL:KYO27150.1, ECO:0000313|Proteomes:UP000050525}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO27150.1};
RX   PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA   St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA   Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA   Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA   Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA   Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA   McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA   Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA   Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA   Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA   Ray D.A.;
RT   "Sequencing three crocodilian genomes to illuminate the evolution of
RT   archosaurs and amniotes.";
RL   Genome Biol. 13:415-415(2012).
CC   -!- SIMILARITY: Belongs to the nectin family.
CC       {ECO:0000256|ARBA:ARBA00007810}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KYO27150.1}.
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DR   EMBL; AKHW03005309; KYO27150.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A151MRU3; -.
DR   STRING; 8496.A0A151MRU3; -.
DR   eggNOG; ENOG502R9I0; Eukaryota.
DR   Proteomes; UP000050525; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   CDD; cd00096; Ig; 1.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 3.
DR   InterPro; IPR013162; CD80_C2-set.
DR   InterPro; IPR007110; Ig-like_dom.
DR   InterPro; IPR036179; Ig-like_dom_sf.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR003599; Ig_sub.
DR   InterPro; IPR003598; Ig_sub2.
DR   InterPro; IPR013106; Ig_V-set.
DR   PANTHER; PTHR23277:SF11; NECTIN-4; 1.
DR   PANTHER; PTHR23277; NECTIN-RELATED; 1.
DR   Pfam; PF08205; C2-set_2; 1.
DR   Pfam; PF13927; Ig_3; 1.
DR   Pfam; PF07686; V-set; 1.
DR   SMART; SM00409; IG; 2.
DR   SMART; SM00408; IGc2; 3.
DR   SUPFAM; SSF48726; Immunoglobulin; 2.
DR   PROSITE; PS50835; IG_LIKE; 3.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000050525};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        325..349
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          9..106
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
FT   DOMAIN          125..214
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
FT   DOMAIN          238..309
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
FT   REGION          393..417
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          448..473
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        403..417
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        459..473
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   508 AA;  55476 MW;  338EFC7FBE33E0CA CRC64;
     MLEAAGSLAG VLEVQRSVTA VLGTDAVLPC HYRAQMGEKV VQVTWLKQGA DGHSVELAVL
     HAEHGEHIQE PYKGRVLRQA QGALMDGAIV LKNAVQADEG TYECRLITFP LGNFEASLML
     KVLVPPLPIL NPGPPLEEGQ GRTLAASCTA EGNPVPTVTW QTEVHGTNIT RQSMHPRSAS
     ITSEFFLVPG RSMNGKALTC IVAHPGLQHE KRITHMLSIA YLSDASVLGH EKEEEWHQGK
     EGASLKCLGE GNPPPTYNWT RLEGSIPEGV KVKGDVLVFQ RPLSVSDTGV YVCRVANSFA
     TKEAWANVSI KVSAVKQVDV VSASMVVVGV IAALLLCVLI VVVICMTLYH RRKTKRISEK
     YEEELTLTRE NSIRRLHSSH STDTRNQTEE MLHLRGESRQ GSLRGDSRQG SLRGDSLQGT
     SVCSVLSEEA EGRSYSTLST VREIETQTDV PAAPAPTPEY KDMKEEEEEE RNGDTIKQAM
     THFIQENGTL RAKPSTNGIY INGRGHLV
//
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