ID A0A151MVW8_ALLMI Unreviewed; 1888 AA.
AC A0A151MVW8;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE RecName: Full=Interferon-induced very large GTPase 1-like {ECO:0008006|Google:ProtNLM};
GN ORFNames=Y1Q_0000807 {ECO:0000313|EMBL:KYO28640.1};
OS Alligator mississippiensis (American alligator).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC Alligator.
OX NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO28640.1};
RN [1] {ECO:0000313|EMBL:KYO28640.1, ECO:0000313|Proteomes:UP000050525}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO28640.1};
RX PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA Ray D.A.;
RT "Sequencing three crocodilian genomes to illuminate the evolution of
RT archosaurs and amniotes.";
RL Genome Biol. 13:415-415(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TRAFAC class dynamin-like GTPase
CC superfamily. Very large inducible GTPase (VLIG) family.
CC {ECO:0000256|ARBA:ARBA00006828}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KYO28640.1}.
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DR EMBL; AKHW03004838; KYO28640.1; -; Genomic_DNA.
DR RefSeq; XP_019351856.1; XM_019496311.1.
DR GeneID; 102568476; -.
DR OrthoDB; 5360213at2759; -.
DR Proteomes; UP000050525; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:InterPro.
DR GO; GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
DR CDD; cd01671; CARD; 1.
DR Gene3D; 1.10.533.10; Death Domain, Fas; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR001315; CARD.
DR InterPro; IPR011029; DEATH-like_dom_sf.
DR InterPro; IPR030383; G_VLIG_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR14819; GTP-BINDING; 1.
DR PANTHER; PTHR14819:SF5; INTERFERON-INDUCED VERY LARGE GTPASE 1; 1.
DR Pfam; PF00619; CARD; 1.
DR SMART; SM00114; CARD; 1.
DR SUPFAM; SSF47986; DEATH domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS50209; CARD; 1.
DR PROSITE; PS51717; G_VLIG; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000050525}.
FT DOMAIN 1..89
FT /note="CARD"
FT /evidence="ECO:0000259|PROSITE:PS50209"
FT DOMAIN 928..1172
FT /note="VLIG-type G"
FT /evidence="ECO:0000259|PROSITE:PS51717"
FT REGION 82..316
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 122..136
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 145..177
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 184..203
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 297..313
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1888 AA; 215804 MW; 6F3CF828FD7194A2 CRC64;
MAFEAIHRGR ATLLAHLSVE SELLLDEVAA LGIITEEEYE ALETCAEPRE KVRRLLVKVQ
RKGEDSCQQF LDCLQSLFPD LPPDLWPPQP GSSHHRDKSQ DLAGASSSEE GQPQHPEGAL
PGVRNDLEKP EDALPMGDTP LEDPENVLTS KRRDLEEAGS DLPLERNESD HPKGASPRNG
HALKTEVLVR KHRQEKSEEK SQEAASEGML SIEKNDIGKP VGPFPMKVDT EDQKVTMKPH
LEAPEGAVSS GMRGDAGPWE TGDDEGSGER SCPAGGQAAM SPGSDVSRRA ETSGDDASME
GTESETSEAS SAKLNAGRRR ALKRVLSMLR LKKLKKQKLQ LNDILEITAE SLKDWTPHRL
EDLPWHFLRN IMALNGTARN TSLARDPSED DTSEDEEGDM EGIFSLLDST TGDSLHPLDV
LCAVLHCSDS FLQQEILSKM AMCQFALPLL LPPLDTPKCT LLLWAMRGIV KKWRPHSLAK
SRGFREESLV LAQMPVISFV RLGPCSLSKS KLLNEVLSPT QQHHDFFVHR DMESGNIPRV
IADGLVEISW YFPQGRENSD LFPEPVAVMN LRGDIKSHWP QFSFLTEVSS TVFMLMESID
ESQYELLSSL HGSATKYYFV LNNEGGKAKQ MLGFLNKLAP ALKMTKAQLL VKEKGTNSAE
LGKKLGGTLS RIMDSFQKIT SIQSLALTAR ELGIQVDEDG YECRRAMESV DEITVEIRDV
AEYKREMLKL QGELWKNLAK VEKELCRMKG QRDVPPEDYR ARLRGEQVKL REQQNQCDLT
GGMVKFINVI GQLPPVEKHH FLRWLKFRLD GIARGNLSGL RAKYKEKCRT SGIDARELAE
LDELISASSL GVEHFMRELG QFYEAECTMV KEGNMQPAQR QFIHLPGIAA DLMLEGFPME
LIDGDASNIP LQWVTDVLNQ LQAKVGGKSR MLVLTVLGVQ STGKSTLLNT MFGLQFAVSS
GRCTRGAFMS LIKVAESFRQ ELGCDFILVI DTEGLKAPEL AKLEDSFEHD NELATLVIGL
SDITIVNMAM ENATEMKDIL QIVVHAFLRM GEIGIKPNCQ FVHQNVSDVS AHDQNMRDRK
HLLEQLNEMT KAAARMENQC REMKFSDIMD YDPEKHNWYI PGLWHGVPPM APVNMGYSES
VYELKKYLFE YLRCHSHPGH LKDIPQFIQW VASLWNAVKH ENFIFSFRNS LVAEAYNHLS
VHYAKWEWGF RKEVHLWVSK AETAIQNQSL DNHSPDTLEK LRLEGYQLLY EGEQRTLESL
QGYFESGTEG LHLIEKYRED FLQSAKFLRL ELERYSMQKY EEAIHIQRGR SRIDLLQASY
MKTIEGKVDK LLRACQEREG ELTPKELEEE FKRMWRTTLS ELPLEGLRPC HVLEDMYFQL
QRDLQNKGSM VNQMLHKVQT LLTYQGQLFQ MKKEHLDLSF IKAMCEVFTH DCWHRAEDFS
KALMDECRDY VRQKVQAQGD YDENYCSELL WIINSRLQEE DIRKLKTTLS FEVDLKLHIL
GEAAGAFQKM HEDFIKKNDP QHRLEKLRPQ YFSTFRDLYY EKDACRKKAI DFCNQCLRPA
LEEYVRKRLG IEIVDDFLSS GQSLEYSSRS FFQFTVQKKL LEEMNFDNYV KYISDYEGFV
KTWIWIQLVN RYQMSDALGE LQRDILDGII KKVQEALQSS EHRAPQTISQ FLDRFCQVLD
KELVLSKDSL DVILFKNTAT VGQFSGDIQM FLPQVEESLL SMWEGVRVDG TLSRLHFKPQ
DEIFKRVFGC GKQCPFCKVP CEAGGNDHKE HFASVHRPKG LGRYRFETTS CLVYSLCSSD
VVSTTSFKNW DTNYEWHPYQ AYREVYPDWR IQPDPSIAAS DYWKFIFATF NRRFAKEYSA
NPADLPKEWL KITKGQAMDS IQEAFNMQ
//