ID A0A151MWK7_ALLMI Unreviewed; 542 AA.
AC A0A151MWK7;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 22-FEB-2023, entry version 16.
DE SubName: Full=DNA polymerase iota isoform B {ECO:0000313|EMBL:KYO28916.1};
GN Name=POLI {ECO:0000313|EMBL:KYO28916.1};
GN ORFNames=Y1Q_0009757 {ECO:0000313|EMBL:KYO28916.1};
OS Alligator mississippiensis (American alligator).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC Alligator.
OX NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO28916.1};
RN [1] {ECO:0000313|EMBL:KYO28916.1, ECO:0000313|Proteomes:UP000050525}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO28916.1};
RX PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA Ray D.A.;
RT "Sequencing three crocodilian genomes to illuminate the evolution of
RT archosaurs and amniotes.";
RL Genome Biol. 13:415-415(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KYO28916.1}.
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DR EMBL; AKHW03004724; KYO28916.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151MWK7; -.
DR Proteomes; UP000050525; Unassembled WGS sequence.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0071897; P:DNA biosynthetic process; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.40.1170.60; -; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.30.1490.100; DNA polymerase, Y-family, little finger domain; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR036775; DNA_pol_Y-fam_lit_finger_sf.
DR InterPro; IPR017961; DNA_pol_Y-fam_little_finger.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001126; UmuC.
DR PANTHER; PTHR46404; DNA POLYMERASE IOTA; 1.
DR PANTHER; PTHR46404:SF1; DNA POLYMERASE IOTA; 1.
DR Pfam; PF00817; IMS; 1.
DR Pfam; PF11799; IMS_C; 1.
DR PIRSF; PIRSF036603; DPol_eta; 2.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF100879; Lesion bypass DNA polymerase (Y-family), little finger domain; 1.
DR PROSITE; PS50173; UMUC; 1.
PE 4: Predicted;
KW DNA synthesis {ECO:0000256|ARBA:ARBA00022634};
KW Reference proteome {ECO:0000313|Proteomes:UP000050525}.
FT DOMAIN 53..266
FT /note="UmuC"
FT /evidence="ECO:0000259|PROSITE:PS50173"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 542 AA; 60688 MW; 865041B6A5B99945 CRC64;
MVRAQCGAPH RTPQCAPFGP EAGPAGLGRL GAERREQTMA RALAAGGTAH RVIVHIDLDC
FYAQVEMIHN PELREKPLGV QQKYLVVTCN YEARKLGIKK LMSVRDAKEK CPQLILVNGE
DLTPYREISY KVTELLEEFS PLVERLGFDE NFVDITEMVE KKLGQLQRDG SSKVSVCGHV
YNDQSICLQD MMHVRLIIGS QIAAEMRETM HNRLGLTGCA GVASNKLLSK LVSGTFKPNQ
QTVLLPESCH HLIESLDHIR KVPGIGFKTT KRLELLGLSS IRDLQTCSPE ILVKELGVAV
AERIQKLSCG EDDSLVTPSG PPQSFSDEDS FKKCSSEVEV KKKIEELLTN LLDRIHNDGR
KPRTIRLTIR QFSLTNKWFN RESRQCPIPP HIIQKFGTGT YDVVSPLVDV LMKLFRKMIN
VEMPFHITLL SVCFSNLKAL PSCTRGSIGF YLTRTSSHAS ARTCIQEMES VPQDQAHCCS
SAPAERTEKV QKELLAEWKN QEPVSKMRMN KPCEKLKTSK GKKNAALCSS QSNSLLRYFK
PN
//
