ID A0A151MXC5_ALLMI Unreviewed; 1617 AA.
AC A0A151MXC5;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Zinc finger protein RFP-like {ECO:0000313|EMBL:KYO29213.1};
GN ORFNames=Y1Q_0005907 {ECO:0000313|EMBL:KYO29213.1};
OS Alligator mississippiensis (American alligator).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC Alligator.
OX NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO29213.1};
RN [1] {ECO:0000313|EMBL:KYO29213.1, ECO:0000313|Proteomes:UP000050525}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO29213.1};
RX PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA Ray D.A.;
RT "Sequencing three crocodilian genomes to illuminate the evolution of
RT archosaurs and amniotes.";
RL Genome Biol. 13:415-415(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KYO29213.1}.
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DR EMBL; AKHW03004720; KYO29213.1; -; Genomic_DNA.
DR Proteomes; UP000050525; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd19760; Bbox2_TRIM4-like; 1.
DR CDD; cd19762; Bbox2_TRIM7-like; 1.
DR CDD; cd16594; RING-HC_TRIM7-like_C-IV; 2.
DR CDD; cd12888; SPRY_PRY_TRIM7_like; 1.
DR Gene3D; 2.60.120.920; -; 2.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 3.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR001870; B30.2/SPRY.
DR InterPro; IPR043136; B30.2/SPRY_sf.
DR InterPro; IPR003879; Butyrophylin_SPRY.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR006574; PRY.
DR InterPro; IPR003877; SPRY_dom.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR000315; Znf_B-box.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR24103; E3 UBIQUITIN-PROTEIN LIGASE TRIM; 1.
DR PANTHER; PTHR24103:SF689; E3 UBIQUITIN-PROTEIN LIGASE TRIM7; 1.
DR Pfam; PF13765; PRY; 2.
DR Pfam; PF00622; SPRY; 1.
DR Pfam; PF00643; zf-B_box; 2.
DR Pfam; PF15227; zf-C3HC4_4; 1.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR PRINTS; PR01407; BUTYPHLNCDUF.
DR SMART; SM00336; BBOX; 2.
DR SMART; SM00589; PRY; 2.
DR SMART; SM00184; RING; 2.
DR SMART; SM00449; SPRY; 1.
DR SUPFAM; SSF57845; B-box zinc-binding domain; 4.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 2.
DR SUPFAM; SSF57850; RING/U-box; 2.
DR PROSITE; PS50188; B302_SPRY; 1.
DR PROSITE; PS50119; ZF_BBOX; 2.
DR PROSITE; PS00518; ZF_RING_1; 2.
DR PROSITE; PS50089; ZF_RING_2; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000050525};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00024}.
FT DOMAIN 16..57
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 90..131
FT /note="B box-type"
FT /evidence="ECO:0000259|PROSITE:PS50119"
FT DOMAIN 321..518
FT /note="B30.2/SPRY"
FT /evidence="ECO:0000259|PROSITE:PS50188"
FT DOMAIN 763..807
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 840..881
FT /note="B box-type"
FT /evidence="ECO:0000259|PROSITE:PS50119"
FT REGION 318..338
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 189..223
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 541..593
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1617 AA; 186877 MW; B4C452C8CC0C9E7E CRC64;
MAAQNPIGNL QDEATCPICL EYFTQPVTLE CGHNFCRDCI TQCWNRLQPK CFCPQCRQDV
QQKNLRPNRQ LENILKIAKQ LTVQAVKGAG GKEVCQEHQE PLKLFCEEDQ TPICVVCDRS
RSHRAHAVVP IEEAAKEYKD KIQTHLKTLK QDQEKLKKCK LTGEKSIGEY LRKTEAEQKM
IISQFQQLHQ FLQEKEQLLL AQLRELNKEI VTLQNKNITK LAQRISQLHD LIHEMEGKCQ
QPVSEFLQGV RSTLSRYEKG KFQHMVEIPS ELEKRLKDFS HKNVILTETL RKFKDTLHSE
LEIKNHRLLG LQRHGEITGS LPPGLGKRRR RPPQPYTKAN VTLDPDTAYP KLIVSINQKS
VKHQEEKQTL PDNPQRFDTV PCVLGHEGFT SGRHWWEVEV VEGRYWAVGV ARASVRRKGG
INLSTDKGIW AVECIGTMEY IVARTSPWTR LSLNRNLRTI RISLDYDSGQ VAFFDVENNR
RIFTFPPASF TEDLTPICMV CDRSKEHSFH TVVPIEEAAQ DYKKNIQVYL VILNKKREKL
LNFKASEAKR VREHLKQTEA ERQKIVSEFE QLHQFLKDQE QLLLARLGEL EREFVKSQEE
KSSEVSKGIS VLNKVIADLE EKCQQPASDF LQDIRRILNR CEKMKEFCKP EGISPELEQR
LLHFSRKNIA VKVALKKFKD ALLSELKTER EKSRGGDGQV NVTLDPETAS PQLILSVDRK
SVTWGVTRLS HPENPQRFDA APCVLGSMAD LNPLERLQEE ATCSICLVFF NDPVSLDCGH
NFCRACIAQC WEGVGTDHDS VSCPQCRETF QQRNLRTNRQ LANFVEIAKQ LSVQTAGGTE
GEAKCKEHGE IFKLFCKDDE AFICVICRES RDHRTHKVFP VGEAAEEYKE YLQTQMMTLK
EKREDLMKYK LDGEKESLKW LEKTEAERQK IVLEFQKLRQ FLEEQEQLLL TQLAKLEKEI
VQRQGDSVTN LSKNISQLDN LICEIEGKYQ QPVNEFLKDI KSTLSRCKTV HFKKPVFMPR
DLTVQLSRSS QTNIYLQEAL TKFKETLPFE LRKGIRCFPS QSLSPPTSNE ACRAANQQPR
EDICRGMTER DIKTGMKEDL TGNEDLIISC ASLARGVWSP LHSIYVSVWV EKELQVELSF
CDLSGRRRNG FCDTGQGRAQ QACPFYTALC LVLAAVCHVS RAHRDHRMVP VEEAVQEYKE
KIETQLVILR KERLKLQKFI VKKENVHQKY LNHVQAKRQK ITNEFKELHQ FLEEQEQILL
ALVRVVEEEI VKEQKDFVTR LLEEIAGLSE LISKIEEKCQ QPSSEFLQDI RDTLSRYENV
KFQKAEFFSI DLQKKIHNFA ETCKTLEDTT MKFKDHLLEE MGKNRVDVIL DPATAHSNLT
CLKIREVWNT NRQNKLSLTI LRDSVLLCVC WALKGFWQGN ITGRLAQCPC LTKHILWSPW
RRLPWITRSA PERAGWCVAF ITRKRSLLRL EMGWCLSPQQ NAGVIYSTET DRKSEAEDCI
CVSSRTPSRH RKHIEQMCGF LLLIILHSPG RDLGNWDRIN KGHWYHLERI LGSSCLFLSL
QNFGRGLGSR EQLCAERQEH LEWQGVCPIW SLWCQTGTCT KENKCLESPS GFLGREK
//
