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Database: UniProt
Entry: A0A151NNN6_ALLMI
LinkDB: A0A151NNN6_ALLMI
Original site: A0A151NNN6_ALLMI 
ID   A0A151NNN6_ALLMI        Unreviewed;      1053 AA.
AC   A0A151NNN6;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   24-JAN-2024, entry version 33.
DE   SubName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform A {ECO:0000313|EMBL:KYO38259.1};
GN   Name=SMARCA5 {ECO:0000313|EMBL:KYO38259.1};
GN   ORFNames=Y1Q_0015534 {ECO:0000313|EMBL:KYO38259.1};
OS   Alligator mississippiensis (American alligator).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC   Alligator.
OX   NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO38259.1};
RN   [1] {ECO:0000313|EMBL:KYO38259.1, ECO:0000313|Proteomes:UP000050525}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO38259.1};
RX   PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA   St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA   Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA   Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA   Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA   Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA   McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA   Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA   Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA   Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA   Ray D.A.;
RT   "Sequencing three crocodilian genomes to illuminate the evolution of
RT   archosaurs and amniotes.";
RL   Genome Biol. 13:415-415(2012).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. ISWI subfamily.
CC       {ECO:0000256|ARBA:ARBA00009687}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KYO38259.1}.
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DR   EMBL; AKHW03002524; KYO38259.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A151NNN6; -.
DR   eggNOG; KOG0385; Eukaryota.
DR   Proteomes; UP000050525; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0031491; F:nucleosome binding; IEA:InterPro.
DR   CDD; cd18065; DEXHc_SMARCA1; 1.
DR   CDD; cd00167; SANT; 1.
DR   CDD; cd18793; SF2_C_SNF; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR   Gene3D; 1.20.5.1190; iswi atpase; 1.
DR   Gene3D; 1.10.1040.30; ISWI, HAND domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR015194; ISWI_HAND-dom.
DR   InterPro; IPR036306; ISWI_HAND-dom_sf.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR001005; SANT/Myb.
DR   InterPro; IPR017884; SANT_dom.
DR   InterPro; IPR015195; SLIDE.
DR   InterPro; IPR044755; SMARCA1_N.
DR   InterPro; IPR038718; SNF2-like_sf.
DR   InterPro; IPR000330; SNF2_N.
DR   PANTHER; PTHR45623; CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED; 1.
DR   PANTHER; PTHR45623:SF49; ISW-1; 1.
DR   Pfam; PF09110; HAND; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF09111; SLIDE; 1.
DR   Pfam; PF00176; SNF2-rel_dom; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00717; SANT; 2.
DR   SUPFAM; SSF101224; HAND domain of the nucleosome remodeling ATPase ISWI; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 2.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS51293; SANT; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000050525}.
FT   DOMAIN          167..332
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          462..613
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   DOMAIN          815..867
FT                   /note="SANT"
FT                   /evidence="ECO:0000259|PROSITE:PS51293"
FT   REGION          1..58
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          108..131
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          777..807
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          991..1025
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..20
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        43..58
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        787..807
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1053 AA;  122698 MW;  5F3235DD9CA75059 CRC64;
     MDSGPDSPGR SDDEHGAGLT RRLPEPLVLQ KNDPPFQLKL PPKAARPEKE IDPEYEEKMK
     TDRAKRFEFL LKQTELFAHF IQPAAQKSPT SPLKVKLGRP RIKKDEKQSL ISAGDYRHRR
     TEQEEDEELL SESRKTSNVC VRFEESPSYV KGGTLRDYQV RGLNWMISLY ENGVNGILAD
     EMGLGKTLQT IALLGYLKHY RNIPGPHMVL VPKSTLHNWM NEFKRWVPSL RAVCLIGDKD
     ARAAFIRDVM MPGEWDVCVT SYEMVIKEKS VFKKFNWRYL VIDEAHRIKN EKSKLSEIVR
     EFKTTNRLLL TGTPLQNNLH ELWALLNFLL PDVFNSADDF DSWFDTKNCL GDQKLVERLH
     AVLKPFLLRR IKGEVEKSLP PKKEVKIYLG LSKMQREWYT RILMKDIDIL NSAGKMDKMR
     LLNILMQLRK CCNHPYLFDG AEPGPPYTTD THLVNNSGKM VALDKLLAKL KEQGSRVLIF
     SQMTRLLDIL EDYCMWRGYE YCRLDGQTPH EEREEAIDTF NAPNSSKFIF MLSTRAGGLG
     INLATADVVI LYDSDWNPQV DLQAMDRAHR IGQKKPVRVF RLITENTVEE RIVERAEIKL
     RLDSIVIQQG RLIDQQSNKL AKDEMLQMIR HGATHVFASK DSELTDEDIT TILERGEKKT
     AEMNERLQKM GESSLRNFTM DTEMSLYTFE GEDYREKQKM SMMEWIEPPK RERKANYAVD
     AYFREALRVS EPKIPKAPRP PKQPNIQDFQ FFPPRLFELL EKEILYYRKT IGYKVPRNPD
     LPNAAQAQKE EQKKIDESAP LTPEETEEKE KLLTQGFTNW NKRDFNQFIK ANEKYGRDDI
     DNIAREVEGK SPEEVIEYSA VFWERCNELQ DIERIMAQIE RGEARIQRRI SIKKALDAKI
     ARYKAPFHQL RIQYGTNKGK NYTEEEDRFL ICMLHKMGFD KENVYEELRQ CVRNAPQFRF
     DWFIKSRTAM EFQRRCNTLI SLIEKENMEI EEKERAEKKK RGTKVPASQK RKADSATESS
     GKKDAKKVKS LFLNEISLLM VGRSLAYEVA ESS
//
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