ID A0A151NQC3_ALLMI Unreviewed; 600 AA.
AC A0A151NQC3;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=Tripartite motif-containing protein 29 isoform A {ECO:0000313|EMBL:KYO39042.1};
GN Name=TRIM29 {ECO:0000313|EMBL:KYO39042.1};
GN ORFNames=Y1Q_0022612 {ECO:0000313|EMBL:KYO39042.1};
OS Alligator mississippiensis (American alligator).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC Alligator.
OX NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO39042.1};
RN [1] {ECO:0000313|EMBL:KYO39042.1, ECO:0000313|Proteomes:UP000050525}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO39042.1};
RX PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA Ray D.A.;
RT "Sequencing three crocodilian genomes to illuminate the evolution of
RT archosaurs and amniotes.";
RL Genome Biol. 13:415-415(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KYO39042.1}.
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DR EMBL; AKHW03002395; KYO39042.1; -; Genomic_DNA.
DR RefSeq; XP_006258214.1; XM_006258152.3.
DR AlphaFoldDB; A0A151NQC3; -.
DR STRING; 8496.A0A151NQC3; -.
DR GeneID; 102575349; -.
DR KEGG; amj:102575349; -.
DR CTD; 23650; -.
DR eggNOG; ENOG502QWDV; Eukaryota.
DR OrthoDB; 4117253at2759; -.
DR PhylomeDB; A0A151NQC3; -.
DR Proteomes; UP000050525; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd19840; Bbox1_TRIM29; 1.
DR CDD; cd19769; Bbox2_TRIM16-like; 1.
DR Gene3D; 4.10.830.40; -; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR000315; Znf_B-box.
DR PANTHER; PTHR25465; B-BOX DOMAIN CONTAINING; 1.
DR PANTHER; PTHR25465:SF7; TRIPARTITE MOTIF-CONTAINING PROTEIN 29; 1.
DR Pfam; PF00643; zf-B_box; 1.
DR SMART; SM00336; BBOX; 2.
DR SUPFAM; SSF57845; B-box zinc-binding domain; 1.
DR PROSITE; PS50119; ZF_BBOX; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00024};
KW Reference proteome {ECO:0000313|Proteomes:UP000050525};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00024};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00024}.
FT DOMAIN 238..278
FT /note="B box-type"
FT /evidence="ECO:0000259|PROSITE:PS50119"
FT REGION 1..65
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 286..378
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 1..19
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 20..40
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 41..59
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 600 AA; 67896 MW; 41F7093B3528790A CRC64;
METGSAARTN GTAVKQEDAK SQSSPKKNGE EAKKPTSPSR GEETVKSTGG SSLETGQVKS
SLFPGGEWKR PIIQLVESAD EKRSSYFSMD SGDTKKLPYS GVQLGDFKKP PFSFTEKGDF
KKPFLAAELK KNFLATDGEG RKPLFPSSQF GDLKKPSLPF VETGDLRKLN FNRPERVAGS
RPRVKLEDVL CDSCIDNKQK AVKSCLVCQA SFCDLHLKPH LEGAAFRDHQ LLDPIRDFEA
RKCPVHGKTM ELFCQTDQMC ICYLCMFQEH KNHSTVTVEV EKAGKEAELS LQKEQLQLKI
IEIEDEVDKW QKEKDRIKNF TTNEKATVDQ HFKELVRDLQ MQRDEVKAAL EQREKLASEN
IKEIVQELEE RSKLLQEDKD TRDQIHQISD SVLFLQEFGT LMRNYVPPTS LPTYSVLLEG
DSMSPSMGLL RDDLLNVCMR HVEKICKADL GRNFIERNHM ENGDHRYMFN NYEWNQPDSL
KRFSMYLSPK GNFNTRSWEY SSLQATEEAL GASNPAFSLK VGNGTKLPFQ FSSMGQSSPG
DFSKQSDGSL YTKTAYPSIV RHQSAKVTPQ TWKSSKQSVL SQYRPFYVNK GNGVTSNEAP
//
