ID   A0A151P8W4_ALLMI        Unreviewed;       282 AA.
AC   A0A151P8W4;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   27-MAR-2024, entry version 11.
DE   RecName: Full=Integrase catalytic domain-containing protein {ECO:0000259|PROSITE:PS50994};
GN   ORFNames=Y1Q_0015183 {ECO:0000313|EMBL:KYO45537.1};
OS   Alligator mississippiensis (American alligator).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC   Alligator.
OX   NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO45537.1};
RN   [1] {ECO:0000313|EMBL:KYO45537.1, ECO:0000313|Proteomes:UP000050525}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO45537.1};
RX   PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA   St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA   Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA   Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA   Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA   Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA   McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA   Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA   Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA   Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA   Ray D.A.;
RT   "Sequencing three crocodilian genomes to illuminate the evolution of
RT   archosaurs and amniotes.";
RL   Genome Biol. 13:415-415(2012).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KYO45537.1}.
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DR   EMBL; AKHW03000563; KYO45537.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A151P8W4; -.
DR   STRING; 8496.A0A151P8W4; -.
DR   eggNOG; KOG0017; Eukaryota.
DR   Proteomes; UP000050525; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   PANTHER; PTHR46888:SF1; RIBONUCLEASE H; 1.
DR   PANTHER; PTHR46888; ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000050525}.
FT   DOMAIN          3..161
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
SQ   SEQUENCE   282 AA;  32512 MW;  7BF61459729BA913 CRC64;
     MPIIETPFSR VALDVIGPLP KSHNGYQYIL VLVDYATRFL EAVPLHSITA PKVAEELLKW
     IAWVGIPQEI LTDQGTNFMS GVMKALCKTL GITQLRTSVY HPQTNGLVER LNGTIKWSLR
     RCAQEDPQRW DTLLTPLLFA LRDAPQESTH YSPFQLVYGH SPRGLLQVVC EEWERPMGLG
     VSAEEYHRDL QDHIQKVQRI ARHNVREAQE RQETHYNRRA RPRTFQPGDQ VLVSIPTTSS
     KQLVLWQGPF TVSRQVGPVD YEVRKPGHRR EQQVYHVNRL KE
//