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Database: UniProt
Entry: A0A151PH23_ALLMI
LinkDB: A0A151PH23_ALLMI
Original site: A0A151PH23_ALLMI 
ID   A0A151PH23_ALLMI        Unreviewed;       672 AA.
AC   A0A151PH23;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   20-DEC-2017, entry version 9.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KYO48401.1};
GN   ORFNames=Y1Q_0006643 {ECO:0000313|EMBL:KYO48401.1};
OS   Alligator mississippiensis (American alligator).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC   Alligator.
OX   NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO48401.1};
RN   [1] {ECO:0000313|EMBL:KYO48401.1, ECO:0000313|Proteomes:UP000050525}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO48401.1};
RX   PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA   St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y.,
RA   Gongora J., Dalzell P., Moran C., Bed'hom B., Abzhanov A.,
RA   Burgess S.C., Cooksey A.M., Castoe T.A., Crawford N.G., Densmore L.D.,
RA   Drew J.C., Edwards S.V., Faircloth B.C., Fujita M.K., Greenwold M.J.,
RA   Hoffmann F.G., Howard J.M., Iguchi T., Janes D.E., Khan S.Y.,
RA   Kohno S., de Koning A.J., Lance S.L., McCarthy F.M., McCormack J.E.,
RA   Merchant M.E., Peterson D.G., Pollock D.D., Pourmand N., Raney B.J.,
RA   Roessler K.A., Sanford J.R., Sawyer R.H., Schmidt C.J., Triplett E.W.,
RA   Tuberville T.D., Venegas-Anaya M., Howard J.T., Jarvis E.D.,
RA   Guillette L.J.Jr., Glenn T.C., Green R.E., Ray D.A.;
RT   "Sequencing three crocodilian genomes to illuminate the evolution of
RT   archosaurs and amniotes.";
RL   Genome Biol. 13:415-415(2012).
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|RuleBase:RU003808};
CC       Multi-pass membrane protein {ECO:0000256|RuleBase:RU003808}.
CC   -!- SIMILARITY: Belongs to the calcium channel alpha-1 subunit
CC       (TC 1.A.1.11) family. {ECO:0000256|RuleBase:RU003808}.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:KYO48401.1}.
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DR   EMBL; AKHW03000199; KYO48401.1; -; Genomic_DNA.
DR   Proteomes; UP000050525; Unassembled WGS sequence.
DR   GO; GO:0005891; C:voltage-gated calcium channel complex; IEA:InterPro.
DR   GO; GO:0008331; F:high voltage-gated calcium channel activity; IEA:InterPro.
DR   GO; GO:0050856; P:regulation of T cell receptor signaling pathway; IEA:InterPro.
DR   GO; GO:0043029; P:T cell homeostasis; IEA:InterPro.
DR   GO; GO:0007601; P:visual perception; IEA:InterPro.
DR   InterPro; IPR031688; CAC1F_C.
DR   InterPro; IPR031649; GPHH_dom.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR014873; VDCC_a1su_IQ.
DR   InterPro; IPR030157; VDCC_L_a1F.
DR   InterPro; IPR002077; VDCCAlpha1.
DR   PANTHER; PTHR10037:SF184; PTHR10037:SF184; 1.
DR   Pfam; PF08763; Ca_chan_IQ; 1.
DR   Pfam; PF16885; CAC1F_C; 2.
DR   Pfam; PF16905; GPHH; 1.
DR   Pfam; PF00520; Ion_trans; 1.
DR   PRINTS; PR00167; CACHANNEL.
DR   SMART; SM01062; Ca_chan_IQ; 1.
PE   3: Inferred from homology;
KW   Calcium {ECO:0000256|RuleBase:RU003808};
KW   Calcium channel {ECO:0000256|RuleBase:RU003808};
KW   Calcium transport {ECO:0000256|RuleBase:RU003808};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000050525};
KW   Ion channel {ECO:0000256|RuleBase:RU003808};
KW   Ion transport {ECO:0000256|RuleBase:RU003808};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000050525};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Transport {ECO:0000256|RuleBase:RU003808};
KW   Voltage-gated channel {ECO:0000256|RuleBase:RU003808}.
FT   TRANSMEM     67     85       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    159    182       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      316    350       Ca_chan_IQ. {ECO:0000259|SMART:SM01062}.
FT   COILED      362    382       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   672 AA;  74345 MW;  567C001E683AC594 CRC64;
     MSGSCGPTPP HITPWQNGGH VGESSEDSSR ISITFFRLFR VMRLVKLLSK GEGIRTLLWT
     FIKSFQALPY VALLIAMIFF IYAVIGMQTF GKVALQDGTQ INRNNNFQTF PQAVLLLFRC
     ATGEAWQEIM LASLPGKRCD RESDYGPGEE FSCGSNFAIA YFISFFMLCA FLIINLFVAV
     IMDNFDYLTR DWSILGPHHL DEFKRVWSEY DPAARGRIKH LDVVTLLRRI QPPLGFGKLC
     PHRVACKRLV AMNMPLNADG TVTFNATLFA LVRTSLKIKT EGNLEVANKE LRAVIKKIWK
     RTKPKLLDEV IPPPEEEEVT VGKFYATFLI QDYFRKFRKR KEKGLLGSEA APSCSSALQA
     GLRTLQDLAP EMRRALSDLD EQGASDENGP YEDPEGPYKG PLQAAPLVEV PSPGGLGGLW
     APSCASLAPP LPGTCDEGGE TRAEDMAQPP SSGLHWRRAS RQNSEGSCKT PTIPEKPPTL
     KEYSEETAEE QGFSSREEDS ESQTSRNHQS CLEDPPLRRR RWDPPSGCSL PPQQMGKRRR
     LLPPTPAGRK PAFAIQCLRR QESCEDLPIP GTYHQAPPSH QPLTQVLISE GLGLYARDPK
     FVAVAKREIA DACQLTPAEM ESAACDLLGQ RLAPGGPFAP EAPGSALYSD DEPPRPPAED
     ELADEMACVA AR
//
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