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Database: UniProt
Entry: A0A151R9M2_CAJCA
LinkDB: A0A151R9M2_CAJCA
Original site: A0A151R9M2_CAJCA 
ID   A0A151R9M2_CAJCA        Unreviewed;       790 AA.
AC   A0A151R9M2;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   22-FEB-2023, entry version 23.
DE   SubName: Full=Retrovirus-related Pol polyprotein from transposon 17.6 {ECO:0000313|EMBL:KYP39237.1};
GN   ORFNames=KK1_039482 {ECO:0000313|EMBL:KYP39237.1};
OS   Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX   NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP39237.1, ECO:0000313|Proteomes:UP000075243};
RN   [1] {ECO:0000313|EMBL:KYP39237.1, ECO:0000313|Proteomes:UP000075243}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX   PubMed=22057054; DOI=10.1038/nbt.2022;
RA   Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA   Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA   Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA   Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA   Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT   "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT   of resource-poor farmers.";
RL   Nat. Biotechnol. 30:83-89(2012).
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DR   EMBL; KQ483924; KYP39237.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A151R9M2; -.
DR   Proteomes; UP000075243; Unassembled WGS sequence.
DR   GO; GO:0004190; F:aspartic-type endopeptidase activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0006508; P:proteolysis; IEA:InterPro.
DR   CDD; cd00303; retropepsin_like; 1.
DR   CDD; cd01647; RT_LTR; 1.
DR   Gene3D; 3.30.70.270; -; 2.
DR   Gene3D; 2.40.70.10; Acid Proteases; 1.
DR   Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR   Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR   InterPro; IPR001969; Aspartic_peptidase_AS.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR   InterPro; IPR005162; Retrotrans_gag_dom.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR000477; RT_dom.
DR   InterPro; IPR041577; RT_RNaseH_2.
DR   InterPro; IPR001878; Znf_CCHC.
DR   InterPro; IPR036875; Znf_CCHC_sf.
DR   PANTHER; PTHR24559:SF425; RT_RNASEH DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR   Pfam; PF03732; Retrotrans_gag; 1.
DR   Pfam; PF17919; RT_RNaseH_2; 1.
DR   Pfam; PF08284; RVP_2; 1.
DR   Pfam; PF00078; RVT_1; 1.
DR   Pfam; PF00098; zf-CCHC; 1.
DR   SMART; SM00343; ZnF_C2HC; 2.
DR   SUPFAM; SSF50630; Acid proteases; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR   PROSITE; PS00141; ASP_PROTEASE; 1.
DR   PROSITE; PS50878; RT_POL; 1.
DR   PROSITE; PS50158; ZF_CCHC; 2.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Reference proteome {ECO:0000313|Proteomes:UP000075243};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT   DOMAIN          218..234
FT                   /note="CCHC-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50158"
FT   DOMAIN          239..254
FT                   /note="CCHC-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50158"
FT   DOMAIN          500..679
FT                   /note="Reverse transcriptase"
FT                   /evidence="ECO:0000259|PROSITE:PS50878"
FT   REGION          164..190
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        165..190
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   790 AA;  89825 MW;  7F2CD42E26BA00D8 CRC64;
     MNWLTEIEKI FNVMDCPLTQ KVKLATFMLT ADAHFWWEGA LRRIIDGGVH LNWDNFKRVF
     LEKYFPDDVR SLKEMEFLEH KQGNDMVEAY VTKFDALVRY YTHYHGEGGE RAKCIKFVNG
     LRPEVKTVIN YQEIYHFPTL VNKCSIYDRD NRARAAFYKG AGGPTRTVNP STSGRSKPYS
     TPTRFQGSMA TTNRSKPFIR ESTVNTTGSV GGSTSSGRCG KCGRVGHNKS ECRNKEITCF
     NCNGKGHIST QCPEPPRTRV TGSGSQVERP KTMGRVFALS GVEAAWSKNL IQGTCFIAET
     PFVVLFDSGA THSFISISCV QKLNLPVSLL NFDLVVETPT NGPMTTFSVC LKCPLTISDR
     QFLIDLICLP LSRLNVILGM DWLSSHHVLL NCFDKSISFG ESNSTEFLSA ADIKTCLKEN
     ERVYMILASL TIETDSKLDE IPLVREFPKV FPNDVSSLPP EREIEFSIDL VSGTSPISIA
     PYRMSPKELV ELKKQIEELQ EKQFIRPSVS PWGAPVLLVK KKDGSMRLCV DYRQLNKVTI
     KNKYPLPRID DLMDQLDGAC VFSKIDLRPE YHQIRVRAED VPKTAFRTRY GHYKYLVMPF
     GVTNAPGVFM DYMNRIFHPY LDRFVVVFID DILVYSKTRE EHAEHLRIVL QTLKEKQLYA
     KLSKCEFWLE SVNFLGHVIS KGGIVVDPAK VEAVLEWKAP KSVSEIRSFL RLAGYYRRFI
     ENFSRIALPL TKLTKKNQPF VWDSRCEESF LELKRRLTSA PVLVLPDPSK TFKVFCDASK
     LGLGGVLMQE
//
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