ID A0A151RP04_CAJCA Unreviewed; 515 AA.
AC A0A151RP04;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 15.
DE SubName: Full=Transposon Ty3-I Gag-Pol polyprotein {ECO:0000313|EMBL:KYP44301.1};
GN ORFNames=KK1_034214 {ECO:0000313|EMBL:KYP44301.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP44301.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP44301.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; KQ483632; KYP44301.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151RP04; -.
DR Proteomes; UP000075243; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR45835:SF105; IPP TRANSFERASE; 1.
DR PANTHER; PTHR45835; YALI0A06105P; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000075243}.
FT DOMAIN 310..477
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KYP44301.1"
SQ SEQUENCE 515 AA; 59436 MW; D13152CEB5D862EB CRC64;
VELKKQIEEL QEKQFIRPSV SPWGAPVLLV KKKDGSMRLC VDYRQLNKVT IKNKYPLPRI
DDLMDQLVGA CVFSKIDLRS GYHQIRVRAE DVPKTAFRTR YGHYERFIEN FSRLALPLTK
LTKKDQPFVW DSKCEESFQE LKRRLTSAPV LVLPDPSKTF EVFCDASKLG LGGVLMQEDC
ELTSKSIKLG ALRVTNSLIN EIREGQKIDS FLLSQVEKLN QGMESEFRFG VDGVLRFNDR
LCIPSVLELK KAILEEGHKS ILSIHPGATE MYQDLKKMFW WPKMKREVEE FVYACLVCQK
DKVEHQKPSG LMQPLDVPVW KWDSISMDFV VGLPKTVKNL DAIWVIVDRL TKSAHFIPIN
IRYSLERLTK LYISEIVRLH GVPTSIVSDR DPRFTSRFWE SLHKALGTKL RLSSAYHPQT
DGQTERTIQS LEDLLRACIL ERGGSWDSFL PLIEFTYNNS YHSSIGMAPY EALYGRRCRT
PLCWVEPGEN VMLGPEIVQQ TTEQVKMIQE RMRAT
//
