ID A0A151SDY6_CAJCA Unreviewed; 1305 AA.
AC A0A151SDY6;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:KYP53032.1};
GN ORFNames=KK1_025032 {ECO:0000313|EMBL:KYP53032.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP53032.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP53032.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; KQ483417; KYP53032.1; -; Genomic_DNA.
DR Proteomes; UP000075243; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09272; RNase_HI_RT_Ty1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR025724; GAG-pre-integrase_dom.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR013103; RVT_2.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR42648:SF18; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR42648; TRANSPOSASE, PUTATIVE-RELATED; 1.
DR Pfam; PF13976; gag_pre-integrs; 1.
DR Pfam; PF14223; Retrotran_gag_2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF07727; RVT_2; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000075243};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 229..243
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 475..641
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 181..229
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 709..754
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1305 AA; 148718 MW; 83B0A20004D62D5E CRC64;
MAAKFEIEKF NGNNFSLWKL KIRAILRKDN CLKAIEGRPS DITDEKWREM DDNAVANLHL
AMADSVLSSI AEKTTAKEIW DTLVKLYEVK SLHTRIFLKR KLYTLRMSES TAVTDHINNL
NTLFAQLSTA DFNIVENERA ELLLQSLPDS YDQLIINITN NNVVGRLSFE DVAGAILEEE
SRRKNKEDRL ESSKQAEALT MMRGRSMERG SSGSQNHGRS KSRGRKNLKC YNCGMRGHMK
KDCWHKKSGG GKNSEASTSQ GCVASTQEDG EILYSEAISS RGEKQLHECW ILDSGATWHM
TPNRDWFCTY ESISGGSVFM GNDHALEIAG VGTIKLKMYD GTIRTIQGVR HVKGLKKNLL
SIGQLDDLKC KIHVEGGILK VVKGNLVVMK AEKITSNLYL LLGETLQEAD ASVAAISQEE
ATMMWHRRLG HMSERGLKIL AERNLLSGLK MVTLPFCEHC VTSKQHRLQF AKVTTRSKHI
LDLIHSDVWE SPEISMGGAK YFVSFIDDYS RRLWVYPIKK KSDVFPVFKE FKAQVELDTG
KRIKCLRTDN GGEYIDGDFL AFCKQEGIKR QFTVAHTPQQ NGVAERMNRT LLERTRAMLR
TAGLAKSFWA EAVKTACYLI NRSPSTAIGL KTPMEMWSGK PSNYSSLHVF GCPVYVMYNS
QERTKLDPKS RKCIFLGYAD NVKGYRLWDP TARKVVVSRD VVFAETELQK EQENDSTIKD
TSIVEIGGKS KKDDTSEAEQ EHEEQEPDEA NDEEVQQIRR ERRRPSWHSD YVMASHDAYC
LLTEEGEPST FQEALRSSDV SQWMAAMHEE IEALHRNKTW ELVDLPKGRK AIGCKWVYKI
KRDGNDQVER YRARLVVKGY AQKAGIDFNE IFSPVVRLTT IRVVLAMCAA FNLHLEQLDV
KTAFLHGELQ EEIYMLQPEG FKEQGKENLV CRLTKSLYGL KQAPRCWYKR FDSFIISLGY
NRLSSDHCTY YNRFDDNDFI ILLLYVDDML VVGPNKDQIQ ELKAQLAREF DMKDLGPANK
ILGMQIHRDR KNRRIWLSQK NYLLKVLRRF NMQDCKPIST PLPVNYKLSS SMSPSNEAER
MEMSRVPYAS AVGSLMYAMI CTRPDIAQAV GAVSRFMADP GREHWSIVKR ILRYIKGTSD
VALCFEGSEF VVRGYVDSDF AGDLDKRKST TGYVFTLAGG AVSWLSKLQT VVALSTTEAE
YMAATQACKE AIWIQRLLEE LGHKQEKITV YCDSQSALHI ARNPAFHSRT KHIGVQYHFV
REVVEEGKVD MQKIHTKDNI ADVMTKPVNT DKFTWCRSLF GLLKT
//
