ID A0A151SY95_CAJCA Unreviewed; 1015 AA.
AC A0A151SY95;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=Retrovirus-related Pol polyprotein from transposon 297 family {ECO:0000313|EMBL:KYP59766.1};
GN ORFNames=KK1_015208 {ECO:0000313|EMBL:KYP59766.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP59766.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP59766.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; CM003612; KYP59766.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151SY95; -.
DR Proteomes; UP000075243; Chromosome 10.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 2.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000075243}.
FT DOMAIN 442..571
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
FT DOMAIN 725..886
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 1015 AA; 115412 MW; 32DACFDA268EACD1 CRC64;
MPGIDPSFHC HRLSVCRDAK PVAQKKRKMG GERAQAIKEE TTKLLQAKFI REVKYSTWLA
NVVMVKKSNG KWRMLVYTDL NKACPKDAYP LPHIDALVDG AAGHQRLSFL DAYSGYNQIP
MYPPDEEKTA FITDSANFCY KVMPFGLKNV GATYQRLMDK IFRHQIGTCL EVYVDDMVIK
STSADDHLRD LNTIFDEVRR HQMRLNPMKC TFGVAGGKFL GFMLSKRGIE ANPDKCQAII
NMQSPRNIKE VQRLAGRIAS LARFLPCMAE KSRPIMSLLK KATKFQWSEE CETAFQNFKT
MLITPPLLSK PDPRLDMIIY ISVSDKAIST VLVQKTTEQV PVYFVSRVLQ DAETRYQHLE
KTILALVHTA RRLRHYFQSH WVLVRTDSPI TKVLRKLELA GRMVAWSIEL SQFDIRFEPR
GPIKAQSLAD FLNEFTPEVI PDSHLWTLHV DGSSNQQGSG ADIILEGPGK VVIEQSLRFG
FKTSNNQAEY EALLAGLRLA LDLGITRIQC WSDSQVITRQ VNDTFQIKEP ALLLYFHAFN
KLKGDFEDVQ VKHTPRELNR RADQLAKLAS SKKVSHLRTM IQQELPKPSI TQVECLQVQQ
ETPNWMTGII EYLVTGSLPA DPLEAKKMKI VAARYTLIAG ELFKRGFSSP LLKCLAPEQE
QYVIREIHEG ICGTHSGGRT LAAKIVRAGY YWPTLITDCS KFVQQCRPCQ QHGPLTHQPP
KALHSIATPW PFSIWGMDIL GPFPPAKGQV KFLLVAIDHF TKWIEAEAVA TITANNVQKF
FWKSVITRFG IPYALITDNG LQFTDRHFNE FLTGLGIKHK MTSVEHPQSN GQAEAANKVI
LKELKRRLGQ AKGGWPEHLP EILWAYRCTP QSSTKETPFR LTYGTDAMIP VEVGEPSLRR
TIFNEQTNEE ALNVELDLVD EARDQALIKK EACQARLTRK HQTKVKPREF QPSDLVWRVT
GEARRDKAQG KLAPNWDGPY RIMHNLQNGA YKLEELTGKA IPRTWNATHL KHYFS
//
