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Database: UniProt
Entry: A0A151U2P9_CAJCA
LinkDB: A0A151U2P9_CAJCA
Original site: A0A151U2P9_CAJCA 
ID   A0A151U2P9_CAJCA        Unreviewed;       457 AA.
AC   A0A151U2P9;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   24-JAN-2024, entry version 15.
DE   SubName: Full=Retrovirus-related Pol polyprotein from transposon 297 family {ECO:0000313|EMBL:KYP73577.1};
GN   ORFNames=KK1_006220 {ECO:0000313|EMBL:KYP73577.1};
OS   Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX   NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP73577.1, ECO:0000313|Proteomes:UP000075243};
RN   [1] {ECO:0000313|EMBL:KYP73577.1, ECO:0000313|Proteomes:UP000075243}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX   PubMed=22057054; DOI=10.1038/nbt.2022;
RA   Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA   Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA   Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA   Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA   Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT   "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT   of resource-poor farmers.";
RL   Nat. Biotechnol. 30:83-89(2012).
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DR   EMBL; CM003604; KYP73577.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A151U2P9; -.
DR   Proteomes; UP000075243; Chromosome 2.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   CDD; cd01647; RT_LTR; 1.
DR   Gene3D; 1.10.340.70; -; 1.
DR   Gene3D; 3.30.70.270; -; 2.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR041588; Integrase_H2C2.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR000477; RT_dom.
DR   InterPro; IPR041577; RT_RNaseH_2.
DR   PANTHER; PTHR24559:SF425; RT_RNASEH DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR   Pfam; PF17921; Integrase_H2C2; 1.
DR   Pfam; PF17919; RT_RNaseH_2; 1.
DR   Pfam; PF00665; rve; 1.
DR   Pfam; PF00078; RVT_1; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
DR   PROSITE; PS50878; RT_POL; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000075243}.
FT   DOMAIN          1..82
FT                   /note="Reverse transcriptase"
FT                   /evidence="ECO:0000259|PROSITE:PS50878"
FT   DOMAIN          331..457
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
SQ   SEQUENCE   457 AA;  52011 MW;  804D57AC65D831F7 CRC64;
     MPFGLTNAPA SFQALMNQIF QDFLRKFVLV FFDDILIYSA SWSAHLQHLQ QVLSIMQEHQ
     LHAKLSKCAF GTQQIAYLGH MVSSSGAHMD PDKVQSVLQW PTPTTLKQLR GFLGLTSYYR
     RFIKGYASLA SPLHDLLKKD AFLWSDTTQV AFDNLKRAMT QAPVLVLPNF SIPFELETDA
     SGVGIGAILN KPDKQNVGAD ALSRVDCFAL SMQHCDFLPT LKAQIAVDSE YNRILFGIRA
     GKSFLYYREQ DGLLFWKDRL VIPKQSPLTL KLIQEFHDSP IGGHAGYLRT YQRLLVQFYW
     HGMKQQVYDY VRQCQVCQQA KVSHFLPGGL LQPLPIPERI WDDIAMDFIT GLPLVNGYTV
     IMVVVDRLSK YAHLIPLKTH FTSNIVAEQF IQHVVKLHGI PKSIVSDRDK TFTSNFWQHL
     FKYQGTTLAM STVYHPQTDG QSEALNRCIE MYCNDPP
//
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