GenomeNet

Database: UniProt
Entry: A0A158NB17_ATTCE
LinkDB: A0A158NB17_ATTCE
Original site: A0A158NB17_ATTCE 
ID   A0A158NB17_ATTCE        Unreviewed;       334 AA.
AC   A0A158NB17;
DT   08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT   08-JUN-2016, sequence version 1.
DT   24-JAN-2024, entry version 41.
DE   RecName: Full=Chromo domain-containing protein {ECO:0000259|SMART:SM00298};
GN   Name=105617781 {ECO:0000313|EnsemblMetazoa:XP_012054725.1};
OS   Atta cephalotes (Leafcutter ant).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC   Formicidae; Myrmicinae; Atta.
OX   NCBI_TaxID=12957 {ECO:0000313|EnsemblMetazoa:XP_012054725.1, ECO:0000313|Proteomes:UP000005205};
RN   [1] {ECO:0000313|Proteomes:UP000005205}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21347285; DOI=10.1371/journal.pgen.1002007;
RA   Suen G., Teiling C., Li L., Holt C., Abouheif E., Bornberg-Bauer E.,
RA   Bouffard P., Caldera E.J., Cash E., Cavanaugh A., Denas O., Elhaik E.,
RA   Fave M.J., Gadau J., Gibson J.D., Graur D., Grubbs K.J., Hagen D.E.,
RA   Harkins T.T., Helmkampf M., Hu H., Johnson B.R., Kim J., Marsh S.E.,
RA   Moeller J.A., Munoz-Torres M.C., Murphy M.C., Naughton M.C., Nigam S.,
RA   Overson R., Rajakumar R., Reese J.T., Scott J.J., Smith C.R., Tao S.,
RA   Tsutsui N.D., Viljakainen L., Wissler L., Yandell M.D., Zimmer F.,
RA   Taylor J., Slater S.C., Clifton S.W., Warren W.C., Elsik C.G., Smith C.D.,
RA   Weinstock G.M., Gerardo N.M., Currie C.R.;
RT   "The genome sequence of the leaf-cutter ant Atta cephalotes reveals
RT   insights into its obligate symbiotic lifestyle.";
RL   PLoS Genet. 7:e1002007-e1002007(2011).
RN   [2] {ECO:0000313|EnsemblMetazoa:XP_012054725.1}
RP   IDENTIFICATION.
RG   EnsemblMetazoa;
RL   Submitted (APR-2016) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   EMBL; ADTU01010746; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_012054725.1; XM_012199335.1.
DR   AlphaFoldDB; A0A158NB17; -.
DR   STRING; 12957.A0A158NB17; -.
DR   EnsemblMetazoa; XM_012199335.1; XP_012054725.1; LOC105617781.
DR   GeneID; 105617781; -.
DR   KEGG; acep:105617781; -.
DR   eggNOG; KOG3001; Eukaryota.
DR   InParanoid; A0A158NB17; -.
DR   OMA; GLQTYFD; -.
DR   OrthoDB; 2878816at2759; -.
DR   Proteomes; UP000005205; Unassembled WGS sequence.
DR   GO; GO:0005694; C:chromosome; IEA:UniProt.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd18983; CBD_MSL3_like; 1.
DR   Gene3D; 2.30.30.140; -; 1.
DR   Gene3D; 1.10.274.30; MRG domain; 1.
DR   InterPro; IPR016197; Chromo-like_dom_sf.
DR   InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR   InterPro; IPR008676; MRG.
DR   InterPro; IPR038217; MRG_C_sf.
DR   InterPro; IPR026541; MRG_dom.
DR   InterPro; IPR025995; Tudor-knot.
DR   PANTHER; PTHR10880; MORTALITY FACTOR 4-LIKE PROTEIN; 1.
DR   PANTHER; PTHR10880:SF48; MRG DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF05712; MRG; 1.
DR   Pfam; PF11717; Tudor-knot; 1.
DR   PIRSF; PIRSF038133; HAT_Nua4_EAF3/MRG15; 1.
DR   SMART; SM00298; CHROMO; 1.
DR   SUPFAM; SSF54160; Chromo domain-like; 1.
DR   PROSITE; PS51640; MRG; 1.
PE   4: Predicted;
KW   Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005205};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          6..75
FT                   /note="Chromo"
FT                   /evidence="ECO:0000259|SMART:SM00298"
FT   REGION          70..159
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        70..97
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        98..113
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        114..140
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        141..159
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   334 AA;  38596 MW;  52E9D2DE44075774 CRC64;
     MPPKCKFQEG EKVLCFHGPL IYEAKCLKSS ITKEKQVKYL IHYAGWNKNW DEWVPESRVL
     KYNEANVQKQ REVQRAHSNQ QSAQKNKKGN TATKTQGRRS EGGREKDTDS RSSTPVADKS
     MSRFSKGTSS SVMPSSSHES VSEPPRKKRS RLEPSGETEE YLTKIEVKIK LPEELKFVLI
     DESEIILKHH KLPALPVQNT VDKILDDYVE TKSSGKSNDI RESTLEITKG IREYFNNTLG
     LQLLYKWERP QFIQIMNDNP EALPSQLYGA FHLLRLFVRL GGMLSYTPLD EKSIQLLLSH
     FHDFLQYLQK NNAVLFNLQQ DYTDPSPDYH RKYG
//
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