ID A0A158NJ23_ATTCE Unreviewed; 760 AA.
AC A0A158NJ23;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=Protein SDA1 {ECO:0000256|RuleBase:RU365057};
GN Name=105620652 {ECO:0000313|EnsemblMetazoa:XP_012057531.1};
OS Atta cephalotes (Leafcutter ant).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Myrmicinae; Atta.
OX NCBI_TaxID=12957 {ECO:0000313|EnsemblMetazoa:XP_012057531.1, ECO:0000313|Proteomes:UP000005205};
RN [1] {ECO:0000313|Proteomes:UP000005205}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21347285; DOI=10.1371/journal.pgen.1002007;
RA Suen G., Teiling C., Li L., Holt C., Abouheif E., Bornberg-Bauer E.,
RA Bouffard P., Caldera E.J., Cash E., Cavanaugh A., Denas O., Elhaik E.,
RA Fave M.J., Gadau J., Gibson J.D., Graur D., Grubbs K.J., Hagen D.E.,
RA Harkins T.T., Helmkampf M., Hu H., Johnson B.R., Kim J., Marsh S.E.,
RA Moeller J.A., Munoz-Torres M.C., Murphy M.C., Naughton M.C., Nigam S.,
RA Overson R., Rajakumar R., Reese J.T., Scott J.J., Smith C.R., Tao S.,
RA Tsutsui N.D., Viljakainen L., Wissler L., Yandell M.D., Zimmer F.,
RA Taylor J., Slater S.C., Clifton S.W., Warren W.C., Elsik C.G., Smith C.D.,
RA Weinstock G.M., Gerardo N.M., Currie C.R.;
RT "The genome sequence of the leaf-cutter ant Atta cephalotes reveals
RT insights into its obligate symbiotic lifestyle.";
RL PLoS Genet. 7:e1002007-e1002007(2011).
RN [2] {ECO:0000313|EnsemblMetazoa:XP_012057531.1}
RP IDENTIFICATION.
RG EnsemblMetazoa;
RL Submitted (APR-2016) to UniProtKB.
CC -!- FUNCTION: Required for 60S pre-ribosomal subunits export to the
CC cytoplasm. {ECO:0000256|RuleBase:RU365057}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|RuleBase:RU365057}.
CC -!- SIMILARITY: Belongs to the SDA1 family.
CC {ECO:0000256|RuleBase:RU365057}.
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DR EMBL; ADTU01017356; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_012057531.1; XM_012202141.1.
DR AlphaFoldDB; A0A158NJ23; -.
DR STRING; 12957.A0A158NJ23; -.
DR EnsemblMetazoa; XM_012202141.1; XP_012057531.1; LOC105620652.
DR GeneID; 105620652; -.
DR KEGG; acep:105620652; -.
DR eggNOG; KOG2229; Eukaryota.
DR InParanoid; A0A158NJ23; -.
DR OrthoDB; 5482564at2759; -.
DR Proteomes; UP000005205; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR GO; GO:0042273; P:ribosomal large subunit biogenesis; IEA:UniProtKB-UniRule.
DR GO; GO:0000055; P:ribosomal large subunit export from nucleus; IEA:UniProtKB-UniRule.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027312; Sda1.
DR InterPro; IPR048292; SDA1_C.
DR InterPro; IPR012977; SDA1_N.
DR PANTHER; PTHR12730; HSDA/SDA1-RELATED; 1.
DR PANTHER; PTHR12730:SF0; PROTEIN SDA1 HOMOLOG; 1.
DR Pfam; PF21638; SDA1_C; 1.
DR Pfam; PF08158; SDA1_HEAT; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|RuleBase:RU365057};
KW Protein transport {ECO:0000256|RuleBase:RU365057};
KW Reference proteome {ECO:0000313|Proteomes:UP000005205};
KW Ribosome biogenesis {ECO:0000256|RuleBase:RU365057};
KW Transport {ECO:0000256|RuleBase:RU365057}.
FT DOMAIN 61..423
FT /note="SDA1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF08158"
FT DOMAIN 714..759
FT /note="SDA1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF21638"
FT REGION 486..556
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 584..620
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 681..727
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 492..538
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 587..620
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 691..727
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 760 AA; 88557 MW; DBA65B18F9B7B0BF CRC64;
MVRHNNQLPD NLPQLQNLIK RDPESYKEEF LQQHLHYKSI LEVFRLEPTQ FNKSLDELVT
FLAQVAHCYP NDLKTYPQEI IDILQIHNII LDNEMRMTFC KALIQLRNKS LLEPTALLSL
FFELLRCQDK ILRQFLQTHI VTDIKNINAK HKNAKVNTML QNFMFSMLKD PNIRAAKMSV
DIMIELYNKN IWNDVKTVNV IATGCFSKIT KVMVASLKFF LGTHSEEKES DDSDSDDEPS
MKEIMMANKV NKKTKKRQKQ LKKAKQSFVK AKKKKSKAPQ YNFSALHLIH DPQDFAEKLF
KQIEKNNDRF EVKLMTLDVV SRLIGLHSLF LLNFYPYIQR FLQPHQREVT KLLQFVAQAS
HELVPPDMLE PVLKTLANNF ITERNSADVM AIGLNTVREI CTRCPLAMNE DLFEDLTRYK
HYKERSVMMA AHSLIGTFRR IMPNLLHKKD KGRPTEANIM IRSSKYGEIR ASEFVLGAEV
LYNQSAKNTE ETSDSDEEDD DEWIDVSENN EEEIGDEEIS DEEISEEEIN DEEIDENELT
SESMKSSISE NKDDKTLTSH IVNNSAQNTC EADSGEQKIN KISQKKNALT KQEKKAQKLE
KKAKFKSEKN KELTAERKTK ASVISTERLL TDKDFRKIEV ALAKQDVTYI KRSVKRTHDQ
IETDKGGELV KLSDIENIYK KRKHDKAARQ KSVKKGQEER DKFGFKDRRQ NPLCSTTNRE
KRKGKAFSML KQKLRTKVKR SFREKQIALK NHLIKQKRMK
//
