ID A0A162CF27_9CRUS Unreviewed; 593 AA.
AC A0A162CF27;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 28-JUN-2023, entry version 24.
DE RecName: Full=Pescadillo homolog {ECO:0000256|HAMAP-Rule:MF_03028};
GN Name=EOG090X05E6 {ECO:0000313|EMBL:SVE79463.1};
GN ORFNames=APZ42_019605 {ECO:0000313|EMBL:KZS15062.1};
OS Daphnia magna.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda;
OC Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
OX NCBI_TaxID=35525 {ECO:0000313|EMBL:KZS15062.1, ECO:0000313|Proteomes:UP000076858};
RN [1] {ECO:0000313|EMBL:KZS15062.1, ECO:0000313|Proteomes:UP000076858}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Xinb3 {ECO:0000313|EMBL:KZS15062.1,
RC ECO:0000313|Proteomes:UP000076858};
RC TISSUE=Complete organism {ECO:0000313|EMBL:KZS15062.1};
RA Gilbert D.G., Choi J.-H., Mockaitis K., Colbourne J., Pfrender M.;
RT "EvidentialGene: Evidence-directed Construction of Genes on Genomes.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:SVE79463.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CA-CH-1 {ECO:0000313|EMBL:SVE79463.1}, CH-H-1
RC {ECO:0000313|EMBL:SVE80092.1}, and FR-SA-1
RC {ECO:0000313|EMBL:SVE80705.1};
RA Cornetti L.;
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for maturation of ribosomal RNAs and formation of
CC the large ribosomal subunit. {ECO:0000256|HAMAP-Rule:MF_03028}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000256|HAMAP-
CC Rule:MF_03028}. Nucleus, nucleoplasm {ECO:0000256|HAMAP-Rule:MF_03028}.
CC -!- SIMILARITY: Belongs to the pescadillo family. {ECO:0000256|HAMAP-
CC Rule:MF_03028}.
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DR EMBL; LRGB01000930; KZS15062.1; -; Genomic_DNA.
DR EMBL; LR009844; SVE79463.1; -; mRNA.
DR EMBL; LR010473; SVE80092.1; -; mRNA.
DR EMBL; LR011086; SVE80705.1; -; mRNA.
DR AlphaFoldDB; A0A162CF27; -.
DR STRING; 35525.A0A162CF27; -.
DR EnsemblMetazoa; XM_032938836.2; XP_032794727.1; LOC116931256.
DR OrthoDB; 169151at2759; -.
DR Proteomes; UP000076858; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IEA:UniProtKB-UniRule.
DR GO; GO:0043021; F:ribonucleoprotein complex binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR CDD; cd17709; BRCT_pescadillo_like; 1.
DR Gene3D; 3.40.50.10190; BRCT domain; 1.
DR HAMAP; MF_03028; Pescadillo; 1.
DR InterPro; IPR001357; BRCT_dom.
DR InterPro; IPR036420; BRCT_dom_sf.
DR InterPro; IPR010613; PES.
DR PANTHER; PTHR12221; PESCADILLO - RELATED; 1.
DR PANTHER; PTHR12221:SF6; PESCADILLO HOMOLOG; 1.
DR Pfam; PF16589; BRCT_2; 1.
DR Pfam; PF06732; Pescadillo_N; 1.
DR SMART; SM00292; BRCT; 1.
DR SUPFAM; SSF52113; BRCT domain; 1.
DR PROSITE; PS50172; BRCT; 1.
PE 2: Evidence at transcript level;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|HAMAP-Rule:MF_03028};
KW Reference proteome {ECO:0000313|Proteomes:UP000076858};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517, ECO:0000256|HAMAP-
KW Rule:MF_03028};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552, ECO:0000256|HAMAP-
KW Rule:MF_03028}.
FT DOMAIN 318..411
FT /note="BRCT"
FT /evidence="ECO:0000259|PROSITE:PS50172"
FT REGION 445..593
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 449..473
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 474..528
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 535..564
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 565..593
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 593 AA; 69306 MW; 241F487D64B9745F CRC64;
MGAPMKKKYE AGEATKYITR AQALKKLQLN LKDFRRLCIL KGVYPREPNN RKKAQKGKLD
KKTLYYVKDI RFLSHEPLIW KFRDFKIFMR KMKTAMEKGD KETVARLKEN KPSMKLDHLV
KERYPTFMDA LNDLDDCLTL CFFYSTLPRD TKVPANLISL CRRLTVEFLH YVIAAKALRK
VFISVKGIYY QIEIKGQPVT ILINHQRGFK PTSASDVDYR IMTNFVDFYT SMLGFINFRL
YHSINLQYPP KLPGITVKED ATDEDAVEEY NELVAALNSS LVTNVPQAEE EVQIDEFPSA
EGAEKLEEAK REAEAIERLK SLFKGLKFFI GREVPRESVV FVIRSCDGEA SWDPSIFAGA
TYDETDESIT HQIVDRPSVD KQYLSRYYIQ PQWLFDCINF RRLLPVEDYF IGANLPPHIS
PFVTERLGDY IPPERQMLLA LQRGETLPAE QEEEEEEDES EDDSSEEEEE EDKVEKKEPT
KSQVVKEKKG MKVMRGRVEM PDVKGMEEED KEHYKFRELM IRNKDKRLYR SMMKNRKSRE
REAKRLENKR KQHEKEEKDL KKSTSSGKAL TAKWSIQPQS ATSDTQTKKM KMV
//
