ID A0A162GU74_9MICO Unreviewed; 640 AA.
AC A0A162GU74;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE SubName: Full=N-acetylmuramoyl-L-alanine amidase LytC {ECO:0000313|EMBL:KZX22688.1};
DE EC=3.5.1.28 {ECO:0000313|EMBL:KZX22688.1};
DE SubName: Full=Putative cell wall binding repeat protein {ECO:0000313|EMBL:TCO39631.1};
GN Name=lytC_2 {ECO:0000313|EMBL:KZX22688.1};
GN ORFNames=ACH61_00177 {ECO:0000313|EMBL:KZX22688.1}, EV639_101583
GN {ECO:0000313|EMBL:TCO39631.1};
OS Rathayibacter tanaceti.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Rathayibacter.
OX NCBI_TaxID=1671680 {ECO:0000313|EMBL:KZX22688.1, ECO:0000313|Proteomes:UP000076717};
RN [1] {ECO:0000313|EMBL:TCO39631.1, ECO:0000313|Proteomes:UP000295366}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VKM Ac-2596 {ECO:0000313|EMBL:TCO39631.1,
RC ECO:0000313|Proteomes:UP000295366};
RX PubMed=26203337; DOI=.1186/s40793-015-0017-x;
RA Whitman W.B., Woyke T., Klenk H.P., Zhou Y., Lilburn T.G., Beck B.J.,
RA De Vos P., Vandamme P., Eisen J.A., Garrity G., Hugenholtz P.,
RA Kyrpides N.C.;
RT "Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III:
RT the genomes of soil and plant-associated and newly described type
RT strains.";
RL Stand. Genomic Sci. 10:26-26(2015).
RN [2] {ECO:0000313|EMBL:KZX22688.1, ECO:0000313|Proteomes:UP000076717}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VKM Ac-2596 {ECO:0000313|EMBL:KZX22688.1,
RC ECO:0000313|Proteomes:UP000076717};
RA Vasilenko O.V., Starodumova I.P., Tarlachkov S.V., Dorofeeva L.V.,
RA Evtushenko L.I.;
RT "Draft Genome Sequence of Rathayibacter sp. Strain VKM Ac-2596 Isolated
RT from Leaf Gall Induced by Plant-Parasitic Nematodes.";
RL Submitted (AUG-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:TCO39631.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=VKM Ac-2596 {ECO:0000313|EMBL:TCO39631.1};
RA Whitman W., Huntemann M., Clum A., Pillay M., Palaniappan K., Varghese N.,
RA Mikhailova N., Stamatis D., Reddy T., Daum C., Shapiro N., Ivanova N.,
RA Kyrpides N., Woyke T.;
RL Submitted (MAR-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZX22688.1}.
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DR EMBL; LIIN01000003; KZX22688.1; -; Genomic_DNA.
DR EMBL; SLWP01000001; TCO39631.1; -; Genomic_DNA.
DR RefSeq; WP_068207375.1; NZ_SLWP01000001.1.
DR AlphaFoldDB; A0A162GU74; -.
DR PATRIC; fig|1671680.3.peg.189; -.
DR OrthoDB; 5116373at2; -.
DR Proteomes; UP000076717; Unassembled WGS sequence.
DR Proteomes; UP000295366; Unassembled WGS sequence.
DR GO; GO:0008745; F:N-acetylmuramoyl-L-alanine amidase activity; IEA:UniProtKB-EC.
DR Gene3D; 3.40.50.12090; -; 1.
DR InterPro; IPR007253; Cell_wall-bd_2.
DR InterPro; IPR006311; TAT_signal.
DR PANTHER; PTHR30032:SF8; AMIDASE ENHANCER; 1.
DR PANTHER; PTHR30032; N-ACETYLMURAMOYL-L-ALANINE AMIDASE-RELATED; 1.
DR Pfam; PF04122; CW_binding_2; 3.
DR PROSITE; PS51318; TAT; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000313|EMBL:KZX22688.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000076717};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..41
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 42..640
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5036006726"
FT REGION 297..351
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 303..337
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 640 AA; 64437 MW; 9F5F4422C9970BDB CRC64;
MTADRSHRTP RARWLRTAIA AAGVAALVAA GVTSGAGTAS AVTRSVFVAG SPYDWSITED
YAAAQVAPVA GNATELEVTL SSSARPSTPY PDFSQVQWAL GGSALTGTST LTGGSRTFRI
SMNRTLSSFG GGTVPLRISA QKEPLSSVTL PLGQPFDIGY DLFTTAILTI GPGTGGTLGR
VDLSADAASL QRGGSFWGGN ASATDIAGSD VVVLETSVPG FFDLQGISAN VGPSRSERVP
AQAVVDSDKS SIAVTIPAEA YSAFAGRTGS AVQVSGVSRG GTQPAGATVN VDTAVRVTGA
GPTTPPTTPP TPTATPTPTA TPTPTATPTP TPTATPVPGK PTVSRIAGTD RQGTAVAVSK
RTFGSNVPVV YIATGENFPD ALSAGPAAAK QGGPLLLVDR GSMSQVVRDE LIRLKPAKIV
VVGSELSVGN QVYAELAGYA KNRDIRRLGG VDRYDTSKLI MQYAFSGGSS RAWLATGEKF
PDALSASAAA GSVDSPVVLV NGTLSAADPV TRGIVSGLGV MTLTIAGSEL SVSAGIESSL
PVPTITRIGG IDRYDTSEKL NRAAFTSAKT VYLATGEKFP DALAGAAAAG YTSSPLFAVQ
PTCVPRAVLA DITSSGATEV ILLGSAATLS DSVAALTPCG
//