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Database: UniProt
Entry: A0A162J0Z2_9MICO
LinkDB: A0A162J0Z2_9MICO
Original site: A0A162J0Z2_9MICO 
ID   A0A162J0Z2_9MICO        Unreviewed;       253 AA.
AC   A0A162J0Z2;
DT   06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT   06-JUL-2016, sequence version 1.
DT   24-JAN-2024, entry version 27.
DE   SubName: Full=DNA-binding GntR family transcriptional regulator {ECO:0000313|EMBL:TCO37938.1};
DE   SubName: Full=HTH-type transcriptional repressor YvoA {ECO:0000313|EMBL:KZX20627.1};
GN   Name=yvoA {ECO:0000313|EMBL:KZX20627.1};
GN   ORFNames=ACH61_02250 {ECO:0000313|EMBL:KZX20627.1}, EV639_103125
GN   {ECO:0000313|EMBL:TCO37938.1};
OS   Rathayibacter tanaceti.
OC   Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC   Rathayibacter.
OX   NCBI_TaxID=1671680 {ECO:0000313|EMBL:KZX20627.1, ECO:0000313|Proteomes:UP000076717};
RN   [1] {ECO:0000313|EMBL:TCO37938.1, ECO:0000313|Proteomes:UP000295366}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=VKM Ac-2596 {ECO:0000313|EMBL:TCO37938.1,
RC   ECO:0000313|Proteomes:UP000295366};
RX   PubMed=26203337; DOI=.1186/s40793-015-0017-x;
RA   Whitman W.B., Woyke T., Klenk H.P., Zhou Y., Lilburn T.G., Beck B.J.,
RA   De Vos P., Vandamme P., Eisen J.A., Garrity G., Hugenholtz P.,
RA   Kyrpides N.C.;
RT   "Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III:
RT   the genomes of soil and plant-associated and newly described type
RT   strains.";
RL   Stand. Genomic Sci. 10:26-26(2015).
RN   [2] {ECO:0000313|EMBL:KZX20627.1, ECO:0000313|Proteomes:UP000076717}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=VKM Ac-2596 {ECO:0000313|EMBL:KZX20627.1,
RC   ECO:0000313|Proteomes:UP000076717};
RA   Vasilenko O.V., Starodumova I.P., Tarlachkov S.V., Dorofeeva L.V.,
RA   Evtushenko L.I.;
RT   "Draft Genome Sequence of Rathayibacter sp. Strain VKM Ac-2596 Isolated
RT   from Leaf Gall Induced by Plant-Parasitic Nematodes.";
RL   Submitted (AUG-2015) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:TCO37938.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=VKM Ac-2596 {ECO:0000313|EMBL:TCO37938.1};
RA   Whitman W., Huntemann M., Clum A., Pillay M., Palaniappan K., Varghese N.,
RA   Mikhailova N., Stamatis D., Reddy T., Daum C., Shapiro N., Ivanova N.,
RA   Kyrpides N., Woyke T.;
RL   Submitted (MAR-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KZX20627.1}.
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DR   EMBL; LIIN01000083; KZX20627.1; -; Genomic_DNA.
DR   EMBL; SLWP01000003; TCO37938.1; -; Genomic_DNA.
DR   RefSeq; WP_068211918.1; NZ_SLWP01000003.1.
DR   AlphaFoldDB; A0A162J0Z2; -.
DR   PATRIC; fig|1671680.3.peg.2395; -.
DR   OrthoDB; 3194402at2; -.
DR   Proteomes; UP000076717; Unassembled WGS sequence.
DR   Proteomes; UP000295366; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd07377; WHTH_GntR; 1.
DR   Gene3D; 3.40.1410.10; Chorismate lyase-like; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR028978; Chorismate_lyase_/UTRA_dom_sf.
DR   InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR   InterPro; IPR011663; UTRA.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR44846:SF1; MANNOSYL-D-GLYCERATE TRANSPORT/METABOLISM SYSTEM REPRESSOR MNGR; 1.
DR   PANTHER; PTHR44846; MANNOSYL-D-GLYCERATE TRANSPORT/METABOLISM SYSTEM REPRESSOR MNGR-RELATED; 1.
DR   Pfam; PF00392; GntR; 1.
DR   Pfam; PF07702; UTRA; 1.
DR   PRINTS; PR00035; HTHGNTR.
DR   SMART; SM00345; HTH_GNTR; 1.
DR   SMART; SM00866; UTRA; 1.
DR   SUPFAM; SSF64288; Chorismate lyase-like; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50949; HTH_GNTR; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000313|EMBL:TCO37938.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000076717}.
FT   DOMAIN          22..90
FT                   /note="HTH gntR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50949"
SQ   SEQUENCE   253 AA;  27872 MW;  FD547F315F487DC3 CRC64;
     MPQDEQLLPP DFFLGLDRSG PVPLYYQVSN LLEKAILEET LPAGARLENE VALSARLGLS
     RPTIRRAIQE LVDKGLLVRR RGIGTQVVHG RVTRTVELTS LYEDLERTGQ KPETTLLSFS
     VEGADEKTAE ALGVAVGSPT LHLKRVRSAD GVPLAILDNV LPEPFADLER DSLEKHGLYQ
     LLRGRGVTMR VAKQRIGARS ATTAESRLLD LPKGAAVLTM GRTAFDSSGR AVEYGQHCYR
     PDLYSFEITL VER
//
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